Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C08
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 31 1.5
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 31 1.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 29 4.6
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 4.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.6
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP PPP PG + G P P P PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -2
Query: 443 PXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXP--XX 270
P S G A+ PPPPG PPP PG T G P P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 751
Query: 269 XXVSXPXPPP 240
+S PPP
Sbjct: 752 PPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP PPP PG + G P P P PPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -2
Query: 443 PXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXP--XX 270
P S G A+ PPPPG PPP PG T G P P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 751
Query: 269 XXVSXPXPPP 240
+S PPP
Sbjct: 752 PPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP PPP PG + G P P P PPP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -2
Query: 443 PXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXP--XX 270
P S G A+ PPPPG PPP PG T G P P
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL 334
Query: 269 XXVSXPXPPP 240
+S PPP
Sbjct: 335 PPISGGPPPP 344
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
PPPP PPP PG T P P ++ PPP
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPP 553
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P S GP G P P
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP-AGAPGQP 260
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P S GP G P P
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP-AGAPGQP 260
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPP 330
P P P P PR P G PPPPGR PPP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGM-----WPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 329 XXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
G P P PPP
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P S GP G P P
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP-AGAPGQP 260
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P S GP G P P
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGP-AGAPGQP 260
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPP 330
P P P P PR P G PPPPGR PPP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGM-----WPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 329 XXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
G P P PPP
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PGA P P GP G P P
Sbjct: 246 AGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGPPGPS-GAPGHP 295
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/86 (23%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = -2
Query: 482 PXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPP-GRXXXGXXXXXXXPPPXXPGXEKK 306
P P + RR A + PPPP PPP P +
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN 571
Query: 305 KTXGXXPRXPXXXXVSXPXPPPGXXG 228
+ P P + P PPP G
Sbjct: 572 LSGAPPPPPPPPPMLGGPPPPPPPPG 597
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/92 (26%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Frame = +1
Query: 238 PGGGXGXETXXXXGWRGXXPXVFFFSXPGXXGGGXXXXXXXPXXXRPG--GGGAXAXXRX 411
PGG G G + P PG GG P PG G G
Sbjct: 317 PGGQGGRGQGPDFGPQDDFPGRRGSGGPGGRGGRGQGPDFEPQDDFPGRRGSGGPGRRGG 376
Query: 412 TAXXPSFDPXGRRGXRXAAGXVXGXXXXGXGP 507
P F P R +G G G GP
Sbjct: 377 RGQGPDFGPQDDFPGRRGSGGPGGRGGRGQGP 408
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P GP G P P
Sbjct: 209 AGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTPGPAGPPGPAGP-AGAPGQP 258
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPG 237
+PPPP PPP G G P P P PP G
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 388 PPPPDGXXXGXXXRXXXPPPXXRGXKKKRRXXGCPAXXFXXXFPXXXRPRGXP 230
PPPP R PPP G G P P PRG P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPG 237
+PPPP PPP G G P P P PP G
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 388 PPPPDGXXXGXXXRXXXPPPXXRGXKKKRRXXGCPAXXFXXXFPXXXRPRGXP 230
PPPP R PPP G G P P PRG P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPG 237
+PPPP PPP G G P P P PP G
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 388 PPPPDGXXXGXXXRXXXPPPXXRGXKKKRRXXGCPAXXFXXXFPXXXRPRGXP 230
PPPP R PPP G G P P PRG P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P GP G P P
Sbjct: 212 AGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGP-AGAPGQP 261
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -3
Query: 679 ARXPRXXGRPPPRRXTXSXGXPXXLVXXPGAERPRXXPASTGPEXGXPXXP 527
A P G+P + G P +V PG P P GP G P P
Sbjct: 208 AGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGPPGP-AGAPGQP 257
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
APPPP PPP G G P P + PPP
Sbjct: 200 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 250
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
APPPP PPP G G P P + PPP
Sbjct: 186 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 392 APPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
APPPP PPP G G P P + PPP
Sbjct: 186 APPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,274,773
Number of Sequences: 27780
Number of extensions: 200068
Number of successful extensions: 508
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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