Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C05
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.1
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.7
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.7
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.7
BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein. 31 3.7
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein. 31 3.7
BC117310-1|AAI17311.1| 1142|Homo sapiens enamelin protein. 31 4.9
BC117308-1|AAI17309.1| 1142|Homo sapiens enamelin protein. 31 4.9
AY167999-1|AAN87336.1| 1142|Homo sapiens enamelin protein. 31 4.9
AF125373-1|AAG43242.1| 1142|Homo sapiens enamelin protein. 31 4.9
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 31 6.5
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 31 6.5
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 31 6.5
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 31 6.5
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 31 6.5
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 31 6.5
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein.
Length = 402
Score = 31.5 bits (68), Expect = 3.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 513 SRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T--PYXKE-FAPGLKPPVV 683
S P + PPL + + D I P T P P +P T P E F+ G PP
Sbjct: 320 STPLGALEPPLAGPHAADNPRFTDMISHP-DTPSPEPGLPGTLHPMPGEVFSGGPSPPFP 378
Query: 684 IRGSISVSHPLGH 722
+ G+ S PL H
Sbjct: 379 MSGTSGYSGPLSH 391
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYCDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein.
Length = 402
Score = 31.5 bits (68), Expect = 3.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 513 SRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T--PYXKE-FAPGLKPPVV 683
S P + PPL + + D I P T P P +P T P E F+ G PP
Sbjct: 320 STPLGALEPPLAGPHAADNPRFTDMISHP-DTPSPEPGLPGTLHPMPGEVFSGGPSPPFP 378
Query: 684 IRGSISVSHPLGH 722
+ G+ S PL H
Sbjct: 379 MSGTSGYSGPLSH 391
>BC117310-1|AAI17311.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +3
Query: 528 SSHPPLRSRLHQPDHQ--IPDSIHQPPQT*HPFPS--IP*TPYXKEFAPGLKPPVVIRGS 695
S PP + L QP H P+ QPPQ PF + P + L PP R
Sbjct: 130 SKKPPQKRPLKQPSHNQPQPEEEAQPPQAFPPFGNGLFPYQQPPWQIPQRLPPPGYGRPP 189
Query: 696 IS---VSHP-LGHWGM-AKGGSPPYF 758
IS +P G++G GG PPY+
Sbjct: 190 ISNEEGGNPYFGYFGYHGFGGRPPYY 215
>BC117308-1|AAI17309.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +3
Query: 528 SSHPPLRSRLHQPDHQ--IPDSIHQPPQT*HPFPS--IP*TPYXKEFAPGLKPPVVIRGS 695
S PP + L QP H P+ QPPQ PF + P + L PP R
Sbjct: 130 SKKPPQKRPLKQPSHNQPQPEEEAQPPQAFPPFGNGLFPYQQPPWQIPQRLPPPGYGRPP 189
Query: 696 IS---VSHP-LGHWGM-AKGGSPPYF 758
IS +P G++G GG PPY+
Sbjct: 190 ISNEEGGNPYFGYFGYHGFGGRPPYY 215
>AY167999-1|AAN87336.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +3
Query: 528 SSHPPLRSRLHQPDHQ--IPDSIHQPPQT*HPFPS--IP*TPYXKEFAPGLKPPVVIRGS 695
S PP + L QP H P+ QPPQ PF + P + L PP R
Sbjct: 130 SKKPPQKRPLKQPSHNQPQPEEEAQPPQAFPPFGNGLFPYQQPPWQIPQRLPPPGYGRPP 189
Query: 696 IS---VSHP-LGHWGM-AKGGSPPYF 758
IS +P G++G GG PPY+
Sbjct: 190 ISNEEGGNPYFGYFGYHGFGGRPPYY 215
>AF125373-1|AAG43242.1| 1142|Homo sapiens enamelin protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = +3
Query: 528 SSHPPLRSRLHQPDHQ--IPDSIHQPPQT*HPFPS--IP*TPYXKEFAPGLKPPVVIRGS 695
S PP + L QP H P+ QPPQ PF + P + L PP R
Sbjct: 130 SKKPPQKRPLKQPSHNQPQPEEEAQPPQAFPPFGNGLFPYQQPPWQIPQRLPPPGYGRPP 189
Query: 696 IS---VSHP-LGHWGM-AKGGSPPYF 758
IS +P G++G GG PPY+
Sbjct: 190 ISNEEGGNPYFGYFGYHGFGGRPPYY 215
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYP 203
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYP 203
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYP 203
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYP 203
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYP 200
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
H P + PDS HQP T PFP P +PY A P
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYP 203
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,479,494
Number of Sequences: 237096
Number of extensions: 2464542
Number of successful extensions: 6410
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6402
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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