Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_C05
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-3|AAB92036.2|  333|Caenorhabditis elegans Hypothetical ...    31   0.73 
U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.7  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    28   9.0  

>AF038611-3|AAB92036.2|  333|Caenorhabditis elegans Hypothetical
           protein E04A4.1 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = +2

Query: 566 RSSNPRFHTPTTPDLTSISINPLNAVLXGVRAGVKASGGHQRLHQRISPPRSLGH 730
           +SSN  FH     DL   S+   NA L   R G+KA   H  +   I    SL H
Sbjct: 17  KSSNYVFHRMLVADLIGFSLTSKNAKLQTKRLGLKAEDVHLEIRSGIIIHISLQH 71


>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/67 (25%), Positives = 27/67 (40%)
 Frame = +2

Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLXGVRAGVKASGGHQRLHQRISP 712
           PPSP+ S    R   PR  +  + +  + ++ P        R+  K S   + L +  S 
Sbjct: 510 PPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGRPRSRSAAKVSENTEPLSEAPSA 569

Query: 713 PRSLGHG 733
           P   G G
Sbjct: 570 PVKRGRG 576


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,267,977
Number of Sequences: 27780
Number of extensions: 352067
Number of successful extensions: 1129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)