Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C03
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 34 0.66
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 34 0.66
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 34 0.66
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 34 0.66
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.5
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.5
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.5
BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open readi... 31 3.5
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.5
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.5
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.5
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.5
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.5
AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens ... 31 3.5
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 33.9 bits (74), Expect = 0.66
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGV-KASVC 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV +A +
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQXLHQRISPP 717
Q Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.9 bits (74), Expect = 0.66
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGV-KASVC 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV +A +
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQXLHQRISPP 717
Q Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.9 bits (74), Expect = 0.66
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGV-KASVC 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV +A +
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQXLHQRISPP 717
Q Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.9 bits (74), Expect = 0.66
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGV-KASVC 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV +A +
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQXLHQRISPP 717
Q Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open reading
frame 25 protein.
Length = 872
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 542 PCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPG---LKPPFVIRXSISVSH 712
P D+ Y+ + +SP + Q P P P P +P PG P + S V+H
Sbjct: 280 PQDVAYLQDMPRSPGDVPQSPSDVSPSPDAPQSPGGMPHLPGDVLHSPGDMPHSSGDVTH 339
Query: 713 PPR 721
PR
Sbjct: 340 SPR 342
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ44216 fis, clone THYMU3003763. ).
Length = 326
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 542 PCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKEFAPG---LKPPFVIRXSISVSH 712
P D+ Y+ + +SP + Q P P P P +P PG P + S V+H
Sbjct: 191 PQDVAYLQDMPRSPGDVPQSPSDVSPSPDAPQSPGGMPHLPGDVLHSPGDMPHSSGGVTH 250
Query: 713 PPR 721
PR
Sbjct: 251 SPR 253
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,753,960
Number of Sequences: 237096
Number of extensions: 2441278
Number of successful extensions: 5827
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5819
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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