Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_C02
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...    48   1e-05
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...    45   8e-05
12_02_0243 + 16237293-16237472,16238078-16238518                       29   3.3  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   5.8  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   5.8  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +2

Query: 62  ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYK 193
           ++A   G    L+  E+DV  MLAA  HLG +N +FQME YVYK
Sbjct: 1   MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYK 44


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 95  LALNEEDVTKMLAATTHLGAENVNFQMETYVYK 193
           L+  E+D+  MLAA  HLG +N +FQME YVYK
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYK 44


>12_02_0243 + 16237293-16237472,16238078-16238518
          Length = 206

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 38  YTRLVVTQISAT-MSGGLD-VLALNEEDVTKMLAATTHLGAENVNFQMETYVYKTTVP 205
           YT  V+T+   T  S G++    +NE DV++ L    ++ ++  + ++  Y+   TVP
Sbjct: 108 YTNQVITETENTNQSNGMERANHVNEMDVSQQLVEQDNMNSQKSSTELNDYLQDETVP 165


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 162  TFSAPRWVVAASILVTSSSLRASTSNP 82
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 294 PWXXPXXXXGXPXXXPPSXXKNPPPP 371
           PW  P      P   P S   NPPPP
Sbjct: 435 PWGQPPPYASYPPPPPGSSMYNPPPP 460


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,908,667
Number of Sequences: 37544
Number of extensions: 375324
Number of successful extensions: 1420
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)