Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_B21
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 34 0.76
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 34 0.76
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 34 0.76
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 34 0.76
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 34 0.76
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 34 0.76
X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein. 32 2.3
X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for ... 32 2.3
BC063110-1|AAH63110.1| 271|Homo sapiens IL17RE protein protein. 32 3.1
AY358451-1|AAQ88816.1| 667|Homo sapiens GSSR3056 protein. 32 3.1
AK074238-1|BAB85028.1| 482|Homo sapiens protein ( Homo sapiens ... 32 3.1
AF458069-1|AAM77573.1| 667|Homo sapiens IL-17RE protein. 32 3.1
AL137002-4|CAM24069.1| 312|Homo sapiens MCF.2 cell line derived... 30 9.4
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 565 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 622
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 679
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 680 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 709
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 565 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 622
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 679
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 680 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 709
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 565 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 622
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 623 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 679
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 680 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 709
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 530 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 587
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 588 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 644
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 645 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 674
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 355 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 412
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 413 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 469
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 470 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 499
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.9 bits (74), Expect = 0.76
Identities = 45/151 (29%), Positives = 54/151 (35%)
Frame = +2
Query: 65 RTDGSRRLAESAVAERRGSRXXXXXXXXXXXXVNGTVRRSRKVPRPDT*RRRSVATSAAC 244
R+ +R + S RRG T RRSR R R RS + + A
Sbjct: 613 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPAR 670
Query: 245 DCGQGRFVGTAPSRSRXXACSPGRLPGTWKWRRSLRITLGDVISAPGRSRVPARRKFERG 424
+ R SRSR A GR RR + RSR PARR G
Sbjct: 671 RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS---G 727
Query: 425 SLNLGVPCSRRGLAAWRTPPTGDGPSRRSAR 517
P +RRG + RTP G SR R
Sbjct: 728 RSRSRTP-ARRGRSRSRTPRRGRSRSRSLVR 757
>X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.3
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = -1
Query: 495 PSPVGGVRQAARPRLEHGTPRFKLPRSNFRRAGTRL--LPGAEITSPSVIRSERLHFQVP 322
PSP + QA + G+P LP G + LPG + PSVI R VP
Sbjct: 181 PSPTSVITQAPPSNRQMGSPTGSLPLVMHLANGQTMPVLPGPPVQMPSVISLARPVSMVP 240
Query: 321 GRRPGEHAXXLERDGAV-PTNRP*P 250
PG + G++ P+ P P
Sbjct: 241 -NIPGIPGPPVNSSGSISPSGHPIP 264
>X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for
ATF-a transcription factor. ).
Length = 483
Score = 32.3 bits (70), Expect = 2.3
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = -1
Query: 495 PSPVGGVRQAARPRLEHGTPRFKLPRSNFRRAGTRL--LPGAEITSPSVIRSERLHFQVP 322
PSP + QA + G+P LP G + LPG + PSVI R VP
Sbjct: 170 PSPTSVITQAPPSNRQMGSPTGSLPLVMHLANGQTMPVLPGPPVQMPSVISLARPVSMVP 229
Query: 321 GRRPGEHAXXLERDGAV-PTNRP*P 250
PG + G++ P+ P P
Sbjct: 230 -NIPGIPGPPVNSSGSISPSGHPIP 253
>BC063110-1|AAH63110.1| 271|Homo sapiens IL17RE protein protein.
Length = 271
Score = 31.9 bits (69), Expect = 3.1
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 124 TWWCAASTRGWCGQ-WHCT 177
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AY358451-1|AAQ88816.1| 667|Homo sapiens GSSR3056 protein.
Length = 667
Score = 31.9 bits (69), Expect = 3.1
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 124 TWWCAASTRGWCGQ-WHCT 177
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AK074238-1|BAB85028.1| 482|Homo sapiens protein ( Homo sapiens
cDNA FLJ23658 fis, clone COLF3416. ).
Length = 482
Score = 31.9 bits (69), Expect = 3.1
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 124 TWWCAASTRGWCGQ-WHCT 177
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AF458069-1|AAM77573.1| 667|Homo sapiens IL-17RE protein.
Length = 667
Score = 31.9 bits (69), Expect = 3.1
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +1
Query: 124 TWWCAASTRGWCGQ-WHCT 177
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AL137002-4|CAM24069.1| 312|Homo sapiens MCF.2 cell line derived
transforming sequence-like protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 463 ETTPRTRHAEIQASALELPPRRDAAPPWSGDHIAKRNPQRAPPLP 329
+T P + + ++ L PP + A P S D AKR+ ++ P P
Sbjct: 199 KTDPLSLEGYVSSAPLTKPPEKGKASPTSPDKKAKRHEVKSDPTP 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,258,143
Number of Sequences: 237096
Number of extensions: 2581960
Number of successful extensions: 7176
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7167
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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