Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_B21
         (858 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    44   3e-04
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA...    29   6.2  

>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
           endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 44.0 bits (99), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 81  AGSLSRLLPNVGGPDMVVRRLYTGVVRSMALYGAPV-RCHALTXDDVAALRRPQRAIAVR 257
           A +L+R++PNVGGP +  RRL   V ++  LY AP+  C +     + + R   R +A+R
Sbjct: 745 AAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYLDSARAVSRTMALR 804


>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
            protein.
          Length = 2224

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 307  AGTPPWDLEVEALAADYAWRCDLRSREEPRP-GAAEVRARKLESRRAV 447
            +G+ PWD E  AL    +W+         RP  AAE   R  ESRRAV
Sbjct: 1812 SGSSPWDGEEPALPGQKSWK---------RPASAAETERRLAESRRAV 1850


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,490,582
Number of Sequences: 53049
Number of extensions: 764295
Number of successful extensions: 2416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2403
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)