Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_B19
         (728 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0603 - 11150739-11150746,11150791-11151340                       31   0.94 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.0  
08_02_0719 + 20388246-20390756,20391159-20391263                       28   8.7  
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16...    28   8.7  

>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 415 PXKXPPXPPXXXXXXPLFXPXXXXXPPPPXGVFF 516
           P   PP PP      PL  P     PPPP G FF
Sbjct: 40  PFGFPPPPPPGSTFVPL--PQSGVPPPPPLGSFF 71


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 415 PXKXPPXPPXXXXXXPLFXPXXXXXPPPP 501
           P   PP PP      P F P     PPPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPP 572


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +1

Query: 382 PXXXKXXXKLXPXKXPPXPPXXXXXXPLFXPXXXXXPPPP 501
           P   K      P K PP PP      P   P     PPPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368


>08_02_0719 + 20388246-20390756,20391159-20391263
          Length = 871

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 7   SNEIPTXPYLLSSETTAKGTGLGGSAGKEDP 99
           SN+IP  P LLSS T  K   + GS  +E P
Sbjct: 551 SNKIPHVPKLLSSTTALKVLSMQGSLIEEFP 581


>05_01_0024 -
           164618-165139,166884-166949,167046-167216,167321-167422,
           167538-167600,167679-167825,168234-168359,168742-168921,
           169183-169322,169688-169861,170096-170123
          Length = 572

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 415 PXKXPPXPPXXXXXXPLFXPXXXXXPPPP 501
           P   P  PP      P++ P     PPPP
Sbjct: 443 PASEPKAPPGWPLQPPMYLPVTPAPPPPP 471


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,664,096
Number of Sequences: 37544
Number of extensions: 186246
Number of successful extensions: 1019
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)