Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_B15
(805 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.11
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 31 0.25
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 31 0.25
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 1.0
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 28 1.4
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 27 2.4
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.1
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 4.1
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 7.2
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 7.2
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 26 7.2
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 25 9.5
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.5
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.9 bits (69), Expect = 0.11
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Frame = +1
Query: 277 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 456
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 457 VEGVNVLATPSSSRITIGGLALMHQATLPWRSRATSTRSSNPRFHTP--TTPDLTSISI 627
V +TP ++ ++ + +T P S + SS P TP TT TS S+
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 597
Score = 31.1 bits (67), Expect = 0.19
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Frame = +1
Query: 289 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 462
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 463 GVNVLATPSSSRITIGGLALMHQATLPWRSRATSTRSSNPRFHTP--TTPDLTSISI 627
V +TP ++ ++ + +T P S + SS P TP TT TS S+
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 538
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 403 SLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRATSTRSSNP 582
S +P T C T+ + G + L+TP + + + P + +T T SS
Sbjct: 219 SSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSS-- 276
Query: 583 RFHTPTTPDLTSISINP 633
T +T TS SI P
Sbjct: 277 PLPTTSTSCTTSTSIPP 293
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 30.7 bits (66), Expect = 0.25
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLAISGYINPIIKSPIPYTNHPRLNIHFHQSPXXRTKKEF 659
HPF+ ++ P+A+ P L + PI+ SP+ Y N LN P +
Sbjct: 233 HPFMQES---KTSPFATRRPSLNTDHHGRPILLSPLNYQN-SSLN------PSTPSPFGG 282
Query: 660 TPGLKPPLSSXAPSAYLTPSS 722
+P + PP+S+ +P P S
Sbjct: 283 SPVMHPPVSNLSPRTPAVPMS 303
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 30.7 bits (66), Expect = 0.25
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +1
Query: 277 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTA 447
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 448 DVTVEGVNVLATP-SSSRITIGGLALMHQATLPWRSRATSTRSSNPRFHTPTTPDLTSIS 624
DV+ E L+TP S +I G + +++ + ++ +S +S P T T+ + S++
Sbjct: 367 DVSDEEQRFLSTPLGSFDESILGSSPINRLSSSFKQYTSSLKS--PGLSTRTSSTMNSLN 424
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 618 HFHQSPXXRTKKEFTPGLKPPLSSXAPSAYLTPSSLGMAKGGSPP 752
HF TK++ P LK L++ + S PSS A GG PP
Sbjct: 264 HFKTGLTWSTKQDAVP-LKTALANLSASKTQAPSSGDSANGGLPP 307
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 624 HQSPXXRTKKEFTPGLKPPLSSXAPS 701
H++P R K TPG KP + S APS
Sbjct: 361 HKNPNLR-KTGPTPGPKPKIKSSAPS 385
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 WDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTD 111
W D+F + +P+ ++A IPSL A SK P T+
Sbjct: 239 WFDIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 524 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILR 405
I A P +R AS+ TP+ T+A+ QQ GI+R
Sbjct: 9 IPAEPSAAVRSGNAAASS-TPNMKTAAIQQQIDDTVGIMR 47
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 259 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVN 372
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 533 PPSPG--DLGLHQPDHQIPDSIHQPPQT*HPFPSIPXTPY*KGV 658
P +PG +L + QP +P + PP PFP P P G+
Sbjct: 509 PGAPGMPNLNMSQPP-MVPPGMALPPGMPAPFPGYPAVPAMPGI 551
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 340 IKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
+K RD YL NLEA FPS+ +KI +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 509 PIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTAS 375
P ++E + TL +T+T V + + +L++ AEGK TAS
Sbjct: 507 PEEIKERIAIPKTLI-ATITLPDVSPNAKIELVLQIDAEGKLTAS 550
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 100 GVWKKRKH*PRREWPKRQKRXKAQF 26
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 569 RVDVARDRQGRVA*CIRARPPIVMREDE 486
RVD R +A IR R P+ ++EDE
Sbjct: 472 RVDALRSSANSIASSIRRRHPVNIQEDE 499
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Frame = +3
Query: 528 SSHPPLAISGYINPIIKSPIPYTNHPRLNIHFHQSPXX-----RTKKEFTP-----GLKP 677
SS P + S +++ S P+T LN + H SP RT+ F P GLKP
Sbjct: 237 SSTSPFSGSKFLS---SSSYPHTPEAHLNSN-HISPASFGSGIRTRNIFNPESMSLGLKP 292
Query: 678 PLSSXAPSAYLTP 716
P+ + + SA + P
Sbjct: 293 PILNRSYSASMAP 305
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.5
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +1
Query: 406 LKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRATSTRSS--- 576
L I ++ C A TPS+ + + TLP + A T +S
Sbjct: 19 LSITKSIKFCKLRALQVANPQRKAKTPSNHATEELQQSSTNSTTLPTQEAAVETNASASH 78
Query: 577 NPRFHTPTTPDLTSISINP 633
F PTT S+SI+P
Sbjct: 79 ETSFALPTTSPAASLSISP 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,016,316
Number of Sequences: 5004
Number of extensions: 59345
Number of successful extensions: 231
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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