Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_B15
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68011-1|CAA92012.1|  584|Caenorhabditis elegans Hypothetical pr...    31   0.73 
U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.3  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    30   1.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    30   1.7  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   2.9  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   2.9  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z68012-5|CAA92019.1|  408|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    28   9.0  
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z68011-1|CAA92012.1|  584|Caenorhabditis elegans Hypothetical
           protein T21B6.1 protein.
          Length = 584

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 537 PPLAISGYINPIIKSPIPY-TNHPRLNIHFHQSPXXRTKKEFTP 665
           PPL +S + NP+ K P P  +N PRL  H   S   + +  F P
Sbjct: 541 PPLKVSQHENPLYKPPPPIASNSPRLG-HASSSSNQKLQSPFIP 583


>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +3

Query: 555 GYINPI-IKSPIP--YTNHPRLNIHFHQSPXXRTKKEFTPGLKPPLSSXAPSAYLTPSS 722
           G ++P  I SP+P     HP++N  ++Q+P  + K  F      P+ S A S+Y TP++
Sbjct: 502 GSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSFPS--SAPIGSGA-SSYSTPAA 557


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +3

Query: 555 GYINPI-IKSPIP--YTNHPRLNIHFHQSPXXRTKKEFTPGLKPPLSSXAPSAYLTPSS 722
           G ++P  I SP+P     HP++N  ++Q+P  + K  F      P+ S A S+Y TP++
Sbjct: 328 GSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSFPS--SAPIGSGA-SSYSTPAA 383


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +3

Query: 525 ASSHPPLAISGYINPIIKSPIPYTNHPRLNIHFHQSPXXRTKKEFTPGLKPPLSSXAPSA 704
           +SS  P++    IN  ++ PI   +    ++  + +P    ++  +  L PP    +PS 
Sbjct: 194 SSSRNPIS-DEKINTNMREPIDQLHKDFYSMWSYDTPQTSPRRAQSASLSPPYGVPSPS- 251

Query: 705 YLTPSSLGMAKGGSP 749
           Y  PSS+  +   SP
Sbjct: 252 YSFPSSVASSASSSP 266


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 663 PGLKPPLSSXAPSAYLTPSSLGMAKGGSPP 752
           PG+ P LS+ AP+    P  +GMA GG PP
Sbjct: 526 PGMAP-LSTGAPTPP-PPPPVGMANGGPPP 553


>Z68012-5|CAA92019.1|  408|Caenorhabditis elegans Hypothetical
           protein T24D5.5 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -3

Query: 629 LMEMDVKSGVVGVWNRGFDDRVDVARDRQGRVA--*CIRARPPIVMRED 489
           L  M+ +S ++  W R  DDRV+  R     +    C+ + PP V+  D
Sbjct: 327 LSNMNAQSSLMVCWKRSTDDRVNAQRFATSHLEHNSCLESLPPHVLYPD 375


>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 573 IKSPIPYTNHPRLNIHFHQSPXXRTKKEFTPGLKPPLSSXAPSAYLTP 716
           I SP  Y+N PR    FH+ P      +F    +  LSS +P++  +P
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDP--NALSQFQQSREALLSSTSPTSNYSP 156


>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
            C38D4.3 protein.
          Length = 1784

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +1

Query: 487  SSSRITIGGLALMHQATLPWRSRATSTRSSNPRFHTPTTPDLTSISI 627
            +S++ T+     + ++ +P RS +  TRS++ R  T   PD TS+++
Sbjct: 1451 ASAQKTVAANKSVLESEIPSRSASRRTRSTSLRNDTVAEPDETSVAM 1497


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 376 EAVVFPSAPSLKIPV-TVDLCWTTADVTVE-GVNVLATPSSSRITIGGLALMHQATLPWR 549
           EA +    P  KIP  TV L   +++V +  G+ +LAT +++ I  GG+ L+    + + 
Sbjct: 90  EAALLAGVPD-KIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYN 148

Query: 550 SRA 558
             A
Sbjct: 149 RNA 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,342
Number of Sequences: 27780
Number of extensions: 344096
Number of successful extensions: 1155
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)