Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_B08
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.027
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 36 0.027
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 36 0.047
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 36 0.047
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 36 0.047
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.047
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.062
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.062
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 35 0.062
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 35 0.062
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 35 0.062
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 34 0.11
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 34 0.14
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 34 0.14
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 34 0.14
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 34 0.14
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 34 0.14
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.14
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 34 0.14
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.19
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 33 0.25
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.25
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.25
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.25
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 33 0.25
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.25
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.44
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 32 0.44
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 32 0.44
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.44
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 31 0.76
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 31 0.76
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 31 0.76
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 31 0.76
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 31 0.76
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 31 0.76
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 31 1.0
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 31 1.0
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 31 1.0
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 31 1.3
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 31 1.3
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.1
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 29 3.1
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 29 3.1
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 29 3.1
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.1
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 4.1
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 29 5.4
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 7.1
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 7.1
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 7.1
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 28 7.1
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 28 7.1
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 28 7.1
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 28 7.1
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 28 7.1
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 28 7.1
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 28 7.1
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 9.4
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 28 9.4
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 9.4
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 28 9.4
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 9.4
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 28 9.4
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 345 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
+S +LWRPDV+L N+ + + Y+ R VS+NG V + + +P D
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 522 TCTFXXGS 545
TC GS
Sbjct: 163 TCFLKLGS 170
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 336 WL-VSSERLWRPDVVLLNAA-ATTAGDYALR-ARVSNNGSVSXIKRLDISTPISMQLXNW 506
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +++ N+
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 507 PNDMXTCTFXXGS 545
P D+ C GS
Sbjct: 160 PYDVQKCNISMGS 172
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 268
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 269 DLQMNWIDKRLSWNAGGVGLQH 334
+ + W D L WN V ++
Sbjct: 77 EFLLRWYDPILHWNQSAVSYEN 98
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 W---NAGGVGLQHL 337
W N GGV + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 W---NAGGVGLQHL 337
W N GGV + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 W---NAGGVGLQHL 337
W N GGV + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 348 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
SERLW P+V +N+ +T + + NG+V R+ +S P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTVWLNYRVQVSAPCSFELSRFPIDA 171
Query: 519 XTC 527
C
Sbjct: 172 QEC 174
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
YD D+P + L +L+ + E E V + +L W D RLSWNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWN 310
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWD 127
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 318 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSXIKRLDISTPISM 491
+WG S ++W P++V +N +T+ G + +N G + +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 492 QLXNWPNDM 518
Q ++PNDM
Sbjct: 186 QYEDYPNDM 194
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 280
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 281 NWIDKRLSWNAGGVGLQHL 337
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISM 491
E+G T L + LW+PD++L N+A + + VS+NG V +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 492 QLXNWPNDMXTCTFXXGS 545
+ +P D C GS
Sbjct: 152 SMTWFPYDQQVCYLKFGS 169
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
V S+R+W PD+VL NA + V ++G V+ + + + + +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 519 XTCTFXXGSXMXXSD 563
CT GS S+
Sbjct: 197 QCCTLVFGSWTYNSE 211
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 525 CTFXXGSXMXXSD 563
C S S+
Sbjct: 173 CILIFESYSHNSE 185
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 525 CTFXXGSXMXXSD 563
C S S+
Sbjct: 173 CILIFESYSHNSE 185
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 525 CTFXXGSXMXXSD 563
C S S+
Sbjct: 173 CILIFESYSHNSE 185
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
V S+R+W PD+VL NA + V ++G V+ + + + + +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 519 XTCTFXXGSXMXXSD 563
CT GS S+
Sbjct: 197 QCCTLVFGSWTYNSE 211
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
YD ++P + L +L+ ++E + + + ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 525 CTFXXGSXMXXSD 563
C S S+
Sbjct: 173 CILIFESYSHNSE 185
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 305 W 307
W
Sbjct: 85 W 85
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 348 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
S+ +W PD L N + + R R++ +G V+ RL + SM L N+P D
Sbjct: 132 SQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDS 191
Query: 519 XTCT 530
CT
Sbjct: 192 QNCT 195
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRA---RVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L N+P D+
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 522 TCT 530
C+
Sbjct: 190 KCS 192
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDISTPISMQLXNWPND 515
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q+ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 516 MXTC 527
C
Sbjct: 161 QQIC 164
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDISTPISMQLXNWPND 515
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q+ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 516 MXTC 527
C
Sbjct: 161 QQIC 164
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDISTPISMQLXNWPND 515
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q+ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 516 MXTC 527
C
Sbjct: 145 QQIC 148
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
+LW P+V ++N+ +T D + + NG++ R+ P M L N+P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTIWLNYRIRSEAPCQMNLRNFPLDSIR 194
Query: 525 CT 530
C+
Sbjct: 195 CS 196
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +3
Query: 330 STWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSXIKRLDISTPISMQLX 500
ST ++S +LW+P + L N+A + L A V N G V
Sbjct: 98 STLSIASSKLWQPALQLYNSARGNSWSLYLTGLPAIVYNTGKVWSRGTFSFFVTCQFDFT 157
Query: 501 NWPNDMXTC 527
NWP D +C
Sbjct: 158 NWPYDQQSC 166
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 318 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSXIKRLDISTPIS 488
EW G ++ ++W PD + N T ++ R R V K +D++ P
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCP-- 160
Query: 489 MQLXNWPNDMXTCTFXXGS 545
M + ++P D+ C GS
Sbjct: 161 MSVLSFPFDVQLCALQFGS 179
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 318 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSXIKRLDISTPIS 488
EW G ++ ++W PD + N T ++ R R V K +D++ P
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCP-- 160
Query: 489 MQLXNWPNDMXTCTFXXGS 545
M + ++P D+ C GS
Sbjct: 161 MSVLSFPFDVQLCALQFGS 179
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHLAG 343
++ E + + ++ L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 357 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCTF 533
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 534 XXGS 545
GS
Sbjct: 166 KFGS 169
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPND 515
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 516 MXTC 527
C
Sbjct: 166 QQIC 169
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
+++W PD ++N+ +++ + NG V RL++ TP S+ L +P D
Sbjct: 95 KKIWTPDTCIINSKSSSIHSSPSENTFVILYENGLVWSNFRLNVKTPCSVNLKMFPFDSL 154
Query: 522 TCTFXXGSXMXXSD 563
+C S +D
Sbjct: 155 SCEIVLESYSFNTD 168
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 283
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 284 -WIDKRLSW 307
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 357 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCTF 533
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 534 XXGS 545
GS
Sbjct: 166 KFGS 169
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPND 515
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 516 MXTC 527
C
Sbjct: 166 QQIC 169
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 491
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 492 QLXNWPNDMXTCTFXXGS 545
+ +P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 491
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 492 QLXNWPNDMXTCTFXXGS 545
+ +P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
++WRPD++L N+A+ + V N G V+ I M + +P D C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 531 FXXGS 545
GS
Sbjct: 108 LKFGS 112
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 336 WL-VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSXIKRLDISTPISMQLXNW 506
W+ +S R+W PDV+ + + + A + NG + +ST + + ++
Sbjct: 100 WIKISVSRVWVPDVIFTKRLSVESLLDEDMQMADLRYNGEIRTSLPAVVSTSCPLNIQDF 159
Query: 507 PNDMXTCTFXXGS 545
P+D+ C GS
Sbjct: 160 PHDVQECNISMGS 172
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +2
Query: 104 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 262
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 263 QADLQMNWIDKRLSWN 310
W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
E+LW P+V +N+ T ++ + + NG+V RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTVWVNYRLQVQSPCMVDLVLFPMDIM 172
Query: 522 TC 527
C
Sbjct: 173 NC 174
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV-GLQHL 337
PP +I + L++ ++ + E E D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 116 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 289
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 290 DKRLSWN 310
D RL WN
Sbjct: 93 DDRLMWN 99
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 131 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 295
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 296 RLSWNA---GGVGLQHL 337
+L+WN GGV H+
Sbjct: 89 KLTWNPTDWGGVEYIHI 105
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
VS +++W PD+VL NA + +++ G + + + + + +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 519 XTCTFXXGS 545
CT GS
Sbjct: 167 QVCTLVFGS 175
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 349 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 170
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 169 IVRCEERVD 143
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 349 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 170
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 169 IVRCEERVD 143
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
VS +++W PD+VL NA + +++ G + + + + + +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 519 XTCTFXXGS 545
CT GS
Sbjct: 167 QVCTLVFGS 175
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
VS +++W PD+VL NA + +++ G + + + + + +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 519 XTCTFXXGS 545
CT GS
Sbjct: 167 QVCTLVFGS 175
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
E++WRPD NA + R+ +G V R+ I ++ L +P+D
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 522 TC 527
TC
Sbjct: 95 TC 96
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 349 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 170
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 169 IVRCEERVD 143
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNA 313
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
PP +++ + + + L+ ++ E E V D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 345 SSERLWRPDVVLLNAAA 395
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 212 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN 310
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 429 VSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCTF 533
+S++G V R+ ++ P ++PND CTF
Sbjct: 146 ISSSGMVRTSARMMLTIPCRTGFGSYPNDYKNCTF 180
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
V+ E++W PD+VL NA + + + G+V + + + + +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 519 XTCTFXXGSXMXXSD 563
C+ GS D
Sbjct: 175 QLCSLTFGSWTYNRD 189
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
V+ E++W PD+VL NA + + + G+V + + + + +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 519 XTCTFXXGSXMXXSD 563
C+ GS D
Sbjct: 175 QLCSLTFGSWTYNRD 189
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDM 518
V+ E++W PD+VL NA + + + G+V + + + + +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 519 XTCTFXXGSXMXXSD 563
C+ GS D
Sbjct: 175 QLCSLTFGSWTYNRD 189
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 531 FXXGS 545
F GS
Sbjct: 163 FKFGS 167
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 531 FXXGS 545
F GS
Sbjct: 163 FKFGS 167
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 531 FXXGS 545
F GS
Sbjct: 163 FKFGS 167
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
++W+PDV+L N+ T Y V + G V + + + +P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 531 FXXGS 545
F GS
Sbjct: 163 FKFGS 167
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
E+LW P+ +N+ + + NG+V RL + P M L +P D
Sbjct: 143 EKLWTPNSCFINSKTADIHKSPFPNIFLMIYANGTVWTNYRLKLQGPCIMDLTKFPFDNV 202
Query: 522 TCTFXXGSXMXXSD 563
TC+ S +D
Sbjct: 203 TCSLTFESFNYNTD 216
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W+PDV NA + + +GS+ R+ + ++ L WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 525 C 527
C
Sbjct: 170 C 170
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXT 524
++W+PDV NA + + +GS+ R+ + ++ L WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 525 C 527
C
Sbjct: 170 C 170
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 274
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 275 QMNWIDKRLSWN 310
+ W D+ L WN
Sbjct: 81 ILQWKDEFLFWN 92
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGGVG 325
IDKRLS+ G G
Sbjct: 121 IDKRLSYGVKGDG 133
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 213
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 213
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 345 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMX 521
++ +W+PDV+L N+A Y + VS G V + + + + +P D
Sbjct: 107 NANAIWKPDVLLYNSADENFDSTYPVNYVVSYTGDVLQVPPGILKLSCKIDITYFPFDDQ 166
Query: 522 TCTFXXGS 545
C GS
Sbjct: 167 ICHLKFGS 174
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+D D+P + L L+ + E + V + ++ W D RL+WN
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLX 500
G T V +++W PD+VL NA + V + G + + + + +
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 501 NWPNDMXTCTFXXGSXMXXSD 563
+P D C+ GS D
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKD 177
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLSWN 310
E + ++ L +NW+D RLSWN
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWN 177
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLX 500
G T V +++W PD+VL NA + V + G + + + + +
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 501 NWPNDMXTCTFXXGSXMXXSD 563
+P D C+ GS D
Sbjct: 157 FFPFDEQVCSLTFGSWTFRKD 177
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 125 TSLSLMIDSLLAT-YD-RDSPPDSK---IVVNLTLHLRH-ANIRESESTVRIQADLQMNW 286
TS S ++ L + YD R PP +VV++ + LR + I Q L+ +W
Sbjct: 61 TSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESW 120
Query: 287 IDKRLSWNAGGVG 325
IDKRLS+ G G
Sbjct: 121 IDKRLSYGVKGDG 133
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSXIKRLDISTPISMQLXNWPNDMXTCT 530
+LW PDV++ N+A YA V NG V+ + +Q+ +P D+ C
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQVVWFPFDVQECF 165
Query: 531 FXXGS 545
GS
Sbjct: 166 LKFGS 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,725,570
Number of Sequences: 27780
Number of extensions: 257236
Number of successful extensions: 1023
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -