Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_B07
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 37 0.017
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 37 0.017
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 34 0.12
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.64
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 31 0.85
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 1.5
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 29 3.4
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 29 6.0
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.0
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 6.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.0
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 29 6.0
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 6.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.0
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 29 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 6.0
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 29 6.0
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 29 6.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.9
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 PAG-GGRXXXGXPGXXLPSPAXXXXGXPPXRAXPXXXPXGASXGXGGXXXGGGVSXXXXX 660
P G GG G P P PP P G G GG GG+
Sbjct: 127 PGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGH 186
Query: 661 GXSXXPXPHPRVRXXSXXRAXPXXPXPPXHPGG 759
G P H + + P P P PGG
Sbjct: 187 GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = +1
Query: 484 PAG-GGRXXXGXPGXXLPSPAXXXXGXPPXRAXPXXXPXGASXGXGGXXXGGGVSXXXXX 660
P G GG G P P PP P G G GG GG+
Sbjct: 407 PGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGH 466
Query: 661 GXSXXPXPHPRVRXXSXXRAXPXXPXPPXHPGG 759
G P H + + P P P PGG
Sbjct: 467 GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 34.3 bits (75), Expect = 0.12
Identities = 26/95 (27%), Positives = 26/95 (27%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP PPG G G G G P PP PP AP
Sbjct: 220 PPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSS 279
Query: 587 XXGXARSGGXPLXXXAGEGRXXPGXPXXXRPPPAG 483
G G P A PG P P AG
Sbjct: 280 QPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAG 314
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.64
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP P G G G G G G P TPPP P P G
Sbjct: 121 PPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEP-----STPPPCQPCPAGPPGPPGP 175
Query: 587 XXGXARSGG-XPLXXXAGEGRXXPGXPXXXRPPP 489
GG P AG P P PP
Sbjct: 176 DGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
Score = 28.3 bits (60), Expect = 7.9
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 1/106 (0%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCG-XGXXEXPXXXXXETPPPXXXPPXPXEAPXG 591
PP PPG G G G G G G P PP PP P G
Sbjct: 169 PPGPPGPDGTPGEPG-----------GPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQP-G 216
Query: 590 XXXGXARSGGXPLXXXAGEGRXXPGXPXXXRPPPAGXXXXXAGXGG 453
G + G AG G P P P AG G
Sbjct: 217 QPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPG 262
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 248 HLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL 373
+L+ ++E + + ++ ++ W D RLS NA W +T +
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMI 121
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/105 (28%), Positives = 32/105 (30%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP PPG GG G G G E P PP PP P A
Sbjct: 203 PPGPPGPPGGPGNDGQPGGPGNP---GAPGAVTEVPGQQGPPGPPGPAGPPGP--AGNAG 257
Query: 587 XXGXARSGGXPLXXXAGEGRXXPGXPXXXRPPPAGXXXXXAGXGG 453
G A+ G AG PG P +P G GG
Sbjct: 258 QAGYAQPGPAGPPGDAGPD-GAPGNP--GQPGAPGDAGAPGSGGG 299
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 LQMNWIDKRLSXNAGEWGCSTWL-VSSXRLXRPDV 406
L+M W DK+L+ N +WG ++ + S ++ PD+
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDI 115
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 542 PPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXXGP 721
PP G P P PP G G G P G P P P G
Sbjct: 393 PPSAFGAPQG-PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Query: 722 XPXXPXPPXIRXGXGGXXXSRG 787
P PP GG +RG
Sbjct: 452 PPVGAPPPGAAGAPGGNPFARG 473
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 212 PPYSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWG 358
PP +++ + + + L+ ++ E E V L D W D+RL N E+G
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYG 98
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 212 PPYSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWG 358
PP +I + L++ ++ + E E L D + +W D RLS + ++G
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRG-SXPXPVRTXAXGXXP 709
P PP G P P PP G GG P G P + P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 710 XXGPXPXXPXPP 745
GP P PP
Sbjct: 357 SAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRG-SXPXPVRTXAXGXXP 709
P PP G P P PP G GG P G P + P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 710 XXGPXPXXPXPP 745
GP P PP
Sbjct: 367 SAGPGMYPPPPP 378
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP PPG G G G A G P PP PP P A
Sbjct: 189 PPGPPGPAGPAGNDGAAGTPGPDGP--AGESTYPEPAGPGPAGPPGPAGPPGPDGASPTA 246
Query: 587 XXGXARSGGXP 555
G A G P
Sbjct: 247 APGAAGPPGPP 257
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXP- 709
P PP G P P P P GG GG PRG P G P
Sbjct: 140 PAGPPGAVGGPG--PKGPPGPPGGPGELGGPGRGGNRGPPGPRG-PPGEAGPDGEGGRPG 196
Query: 710 XXGPXPXXPXPPXIRXGXGGXXXSRGXXG 796
G P PP + G G S G G
Sbjct: 197 QAGQTRSAPSPPG-QPGQPGEPGSPGEPG 224
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXP- 709
P PP G P P P P GG GG PRG P G P
Sbjct: 140 PAGPPGAVGGPG--PKGPPGPPGGPGELGGPGRGGNRGPPGPRG-PPGEAGPDGEGGRPG 196
Query: 710 XXGPXPXXPXPPXIRXGXGGXXXSRGXXG 796
G P PP + G G S G G
Sbjct: 197 QAGQTRSAPSPPG-QPGQPGEPGSPGEPG 224
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRG-CGXGXXEXPXXXXXETPPPXXXPPXPXEAPXG 591
PP PPG G G G G G P PP PP P A
Sbjct: 185 PPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPT 244
Query: 590 XXXGXARSGGXP 555
G A G P
Sbjct: 245 AAPGAAGPPGPP 256
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 248 HLRHANIRESESTVRILADLQMNWIDKRLSXNAGEW 355
+L+ + E E V ++ +L W D RLS NA ++
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDY 116
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 221 SKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCSTWL 373
+K+V ++ + + I E V++ ++W D +S + +WG S WL
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLS-WL 132
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +2
Query: 200 IGSLPP----YSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSXNAGEWGCS 364
I S+PP + +N L+H + E + I L+++W D RL N W +
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKN 106
Query: 365 TWLVSS 382
+V S
Sbjct: 107 KLVVHS 112
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 239 LTLHLRHANIRESESTVRILADLQMNWIDKRLSXNA 346
L +L+ ++E E V ++ +L W D RLS N+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = -2
Query: 764 PXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGXX 585
P PPG G G G G G PP PP P P
Sbjct: 112 PGPPGTPGPAGRPGKPGRPGACGNHG-NPGKPTGLPCDPVTVPPCKPCPPGPAGEPG--H 168
Query: 584 XGXARSGGXPLXXXAGEGRXXPGXPXXXRPP 492
G + G P G G PG P P
Sbjct: 169 DGAPGAPGKPGAPGVGGGSGAPGAPGPKGAP 199
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.0
Identities = 29/102 (28%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAP--X 594
PP PPG G G G + G + PP P P P
Sbjct: 102 PPGPPGEGGQKGNPGHDGDDGKPGAPGVIVAITHDIPGGCIKCPPGRPGPKGPSGLPGSA 161
Query: 593 GXXXGXARSGGXPLXXXAGEGRXXP----GXP-XXXRPPPAG 483
G G R G P G G P G P RP PAG
Sbjct: 162 GPAGGNGRRG--PPGPVGGPGEQGPQGDAGRPGAAGRPGPAG 201
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPX 712
P PP G P P P PP G GG P G P P G
Sbjct: 726 PPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 713 XGPXPXXP 736
P P P
Sbjct: 783 GPPPPPPP 790
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Frame = +2
Query: 542 PPXXXGXPXXX--PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXX 715
PP G P P + P PP G GG P G P P+ P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
Query: 716 G--PXPXXPXPP 745
G P P P PP
Sbjct: 766 GGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPX 712
P PP G P P P PP G GG P G P P G
Sbjct: 726 PPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 713 XGPXPXXP 736
P P P
Sbjct: 783 GPPPPPPP 790
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Frame = +2
Query: 542 PPXXXGXPXXX--PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXX 715
PP G P P + P PP G GG P G P P+ P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
Query: 716 G--PXPXXPXPP 745
G P P P PP
Sbjct: 766 GGCPPPPPPPPP 777
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 LQMNWIDKRLSXNAGEWG-CSTWLVSSXRLXRPDV 406
L +NW+D RLS N W + R+ +PD+
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDI 199
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 28.7 bits (61), Expect = 6.0
Identities = 29/102 (28%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAP--X 594
PP PPG G G G + G + PP P P P
Sbjct: 96 PPGPPGEGGQKGNPGHDGDDGKPGAPGVIVAITHDIPGGCIKCPPGCPGPKGPSGLPGSA 155
Query: 593 GXXXGXARSGGXPLXXXAGEGRXXP----GXP-XXXRPPPAG 483
G G R G P G G P G P RP PAG
Sbjct: 156 GPAGGNGRRG--PPGPVGGPGEQGPQGDAGRPGAAGRPGPAG 195
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 533 PXRPPXXXGXPXXXPXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPX 712
P PP G P P P PP G GG P G P P G
Sbjct: 309 PPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 713 XGPXPXXP 736
P P P
Sbjct: 366 GPPPPPPP 373
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Frame = +2
Query: 542 PPXXXGXPXXX--PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXX 715
PP G P P + P PP G GG P G P P+ P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 348
Query: 716 G--PXPXXPXPP 745
G P P P PP
Sbjct: 349 GGCPPPPPPPPP 360
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXG- 591
PP PPG G G G G G G + P T P P + P G
Sbjct: 98 PPGPPGAPGDAGLDGENGQAGPNGQDGAGQGSSQQPSECI--TCPAGAPGPQGPDGPAGA 155
Query: 590 -XXXGXARSGGXP 555
G A S G P
Sbjct: 156 PGADGQAGSPGAP 168
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +2
Query: 575 PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXXGPXPXXP--XPPX 748
P S P PP G G G P P P RT + P P P PP
Sbjct: 233 PAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 749 IRXG 760
R G
Sbjct: 292 PRAG 295
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +2
Query: 575 PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXXGPXPXXP--XPPX 748
P S P PP G G G P P P RT + P P P PP
Sbjct: 254 PAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 749 IRXG 760
R G
Sbjct: 313 PRAG 316
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +2
Query: 575 PXXSXXPXAPPXGXGGXXXGGGFLXXXPRGSXPXPVRTXAXGXXPXXGPXPXXP--XPPX 748
P S P PP G G G P P P RT + P P P PP
Sbjct: 239 PAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 749 IRXG 760
R G
Sbjct: 298 PRAG 301
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/97 (26%), Positives = 27/97 (27%), Gaps = 2/97 (2%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXP--PXPXEAPX 594
PP PPG G G G A G G G E P P P P P P
Sbjct: 169 PPGPPGPDGNAGPAGPAGAAGPD---GEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPG 225
Query: 593 GXXXGXARSGGXPLXXXAGEGRXXPGXPXXXRPPPAG 483
G P G +P PAG
Sbjct: 226 AGGTTSTNQPGPPGPAGPPGPAGPAGEDAYAQPSPAG 262
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 LQMNWIDKRLSXNAGEWGCSTW-LVSSXRLXRPDV 406
L+++W D+RL N EW L S RL PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 LQMNWIDKRLSXNAGEWGCSTW-LVSSXRLXRPDV 406
L+++W D+RL N EW L S RL PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/88 (25%), Positives = 25/88 (28%)
Frame = -1
Query: 795 PXXPLEXXXPPXPXRMXGGXGXXGXGPXXGXXPXAXVRTGXGXXPRGXXXRNPPPXXXPP 616
P P + P M G G GP P + G G P +P PP
Sbjct: 1425 PTPPSQNQYSMPPPVMGGHEGSWRGGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPP 1484
Query: 615 XPXGGAXGXXXXXGXXXGXPXXXGGRXG 532
GG G P GG G
Sbjct: 1485 M-RGGGPPMRGGPPMRGGPPMFRGGPPG 1511
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP PPG G G G A Q G PP PP P
Sbjct: 138 PPGPPGEAGTDGEPGQAGQDGQPGQAGQADSGSSGQACITCPAGPP--GPPGP-----DG 190
Query: 587 XXGXARSGGXPLXXXAGEGRXXPGXPXXXRPP 492
G A + G P PG P PP
Sbjct: 191 NAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPP 222
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = -2
Query: 767 PPXPPGXXGGXGXXGXARXXXQXRTRGCGXGXXEXPXXXXXETPPPXXXPPXPXEAPXGX 588
PP PPG G G G Q G P PP PP +
Sbjct: 215 PPGPPGPPGNDGQPGAPGQDGQPGAP--GTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAA 272
Query: 587 XXGXARSGGXPLXXXAGEGRXXPGXP 510
G G P G PG P
Sbjct: 273 QPGPPGPPGPPGNDGQPGGPGQPGGP 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,497,647
Number of Sequences: 27780
Number of extensions: 302422
Number of successful extensions: 1383
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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