Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_B02
         (806 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-P...    31   1.4  
AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembran...    31   1.4  
AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-P...    29   5.7  
AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p pro...    29   7.5  
AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA...    29   7.5  
AE014298-2522|AAF48698.1| 1247|Drosophila melanogaster CG5004-PA...    29   9.9  

>AE014297-2064|AAF55213.2|  636|Drosophila melanogaster CG33207-PB,
           isoform B protein.
          Length = 636

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 405 QWHHVLELQVAAALXYPSRGPSLRVPSFLVQSGPYSESY 521
           Q HH  EL    ++ YPS  P  R P FLV S P  + Y
Sbjct: 185 QQHHS-ELLQGKSIHYPSGYPMTRSPPFLVSSSPGPDPY 222


>AB081475-1|BAC06341.1|  636|Drosophila melanogaster transmembrane
           protein Pxb protein.
          Length = 636

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 405 QWHHVLELQVAAALXYPSRGPSLRVPSFLVQSGPYSESY 521
           Q HH  EL    ++ YPS  P  R P FLV S P  + Y
Sbjct: 185 QQHHS-ELLQGKSIHYPSGYPMTRSPPFLVSSSPGPDPY 222


>AE014296-2765|AAF49441.1|  197|Drosophila melanogaster CG16724-PA,
           isoform A protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 364 HSRSEMSASRRRLSAPNAYDSPP 296
           HSRS  S  RRR  +P+ Y+ PP
Sbjct: 111 HSRSRSSERRRRQRSPHRYNPPP 133


>AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p
           protein.
          Length = 1226

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 400 QHNGTMCSSCRSRPLXSI 453
           +H GTMC +CR +P+  I
Sbjct: 173 KHEGTMCDTCRQQPIFGI 190


>AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA
           protein.
          Length = 1226

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 400 QHNGTMCSSCRSRPLXSI 453
           +H GTMC +CR +P+  I
Sbjct: 173 KHEGTMCDTCRQQPIFGI 190


>AE014298-2522|AAF48698.1| 1247|Drosophila melanogaster CG5004-PA
           protein.
          Length = 1247

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 324 ESRRRLALISDRECPQLQAGAARLPPAQWHHVLELQVAAALXYPSRGPSLRV 479
           E R+R  LI  R+  QL+   A LPP+     LEL++      PS  P L++
Sbjct: 569 EQRQRRELIQRRK--QLKRELAELPPSAGIEGLELKLGEQPLAPSASPRLQL 618


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,945,066
Number of Sequences: 53049
Number of extensions: 623921
Number of successful extensions: 1501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)