Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_B01
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.037
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.037
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.037
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.037
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 36 0.037
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 35 0.064
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 34 0.15
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.20
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.20
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 33 0.20
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.20
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.20
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.20
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.45
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.45
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 32 0.60
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 31 1.4
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.8
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 30 1.8
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 30 1.8
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 30 1.8
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 29 3.2
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.2
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.6
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 7.4
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 9.7
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 28 9.7
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 9.7
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 28 9.7
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 28 9.7
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 28 9.7
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 150 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 326
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 327 RVG 335
G
Sbjct: 130 LFG 132
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 174 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 323
YD D+P + L +L+ + E E V + +L W D RLSWNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 174 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 323
YD ++P + L +L+ ++E + + + ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 150 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 314
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 315 WNAGRVG 335
W+ G
Sbjct: 90 WDPVNYG 96
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 150 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 314
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 315 WNAGRVG 335
W+ G
Sbjct: 90 WDPVNYG 96
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 150 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 314
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 315 WNAGRVG 335
W+ G
Sbjct: 90 WDPVNYG 96
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 207 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 320
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 207 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 320
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 150 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 314
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 315 W 317
W
Sbjct: 85 W 85
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 216 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 323
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 240 NIRESESTVRIQADLQMNWIDKRLSWNA---GRVGLQHLAG 353
++ E + + ++ L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +3
Query: 114 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 272
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 273 QADLQMNWIDKRLSWNAGRVGLQHLAGVLGTLV 371
W D RLSW+ + Q V T+V
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMV 149
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 174 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 323
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 278
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 279 DLQMNWIDKRLSWNAGRVGLQH 344
+ + W D L WN V ++
Sbjct: 77 EFLLRWYDPILHWNQSAVSYEN 98
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +1
Query: 346 WL-VSSERLWRPDVVLLNA---GATTAGDYALRPRVWSNGSXSWXKRLDISTPISMQXDN 513
W+ +S+ R W PDV+ N D + + NG + +S+P ++ DN
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRY-NGEIRTSRPAVVSSPCPLEIDN 158
Query: 514 WPQRLHTCTXPXG 552
+P + C G
Sbjct: 159 FPYDVQKCNISMG 171
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 126 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 299
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 300 DKRLSWN 320
D RL WN
Sbjct: 93 DDRLMWN 99
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 358 SERLWRPDVVLLNAGATTAGDYA---LRPRVWSNGSXSWXKRLDISTPISMQXDNWPQRL 528
SERLW P+V +N+ +T + ++ NG+ R+ +S P S + +P
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTVWLNYRVQVSAPCSFELSRFPIDA 171
Query: 529 HTC 537
C
Sbjct: 172 QEC 174
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +3
Query: 111 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 290
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 291 NWIDKRLSWNAGRVGLQHL 347
+W D +SW+ + GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 328 EWGCSTWLVSSERLWRPDVVLLNAGATTAGDYALRPRVWSN--GSXSWXKRLDISTPISM 501
+WG S ++W P++V +N G+T+ + +N G +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 502 QXDNWP 519
Q +++P
Sbjct: 186 QYEDYP 191
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 189 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGRV-GLQHL 347
PP +I + L++ ++ + E E D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 210 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGRVGLQHL 347
VN+ L + H + E E T + + WID+ + W+A + + L
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKL 100
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 359 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 180
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 82 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 141
Query: 179 IVRCEERVD 153
I+ C R+D
Sbjct: 142 ILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 359 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 180
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 179 IVRCEERVD 153
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 216 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 320
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 189 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGRV-GLQHL 347
PP +++ + + + L+ ++ E E V D W D+RL WN G+ H+
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHI 103
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 359 EDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVP 180
E+ V + C P F D + H G+T+ ++Q+ ++D G GV
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVI 867
Query: 179 IVRCEERVD 153
I+ C R+D
Sbjct: 868 ILGCTSRID 876
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 120 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 293
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 294 -WIDKRLSW 317
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 141 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 305
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 306 RLSWN 320
+L+WN
Sbjct: 89 KLTWN 93
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 228 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGRVG 335
+R ++ E + L+M W D RL W+ GR G
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWG 94
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 222 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN 320
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 361 ERLWRPDVVLLNAGATTAGDYALRP---RVWSNGSXSWXKRLDISTPISMQXDNWPQRLH 531
+RLW P+ +N+ + R ++ NG+ R+ + P S+ N+P L
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 532 TCT 540
C+
Sbjct: 190 KCS 192
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 407 PPPGTTLSAPVYGVTAPXPGXSAWTLAXQFXCSXTIGPSDXTPARPP 547
PPP +AP+ AP P A + + T S P PP
Sbjct: 138 PPPAAAAAAPISPKAAPTPQSPAPNRVPHYRQTSTASVSSTIPPPPP 184
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 120 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 284
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 285 QMNWIDKRLSWN 320
+ W D+ L WN
Sbjct: 81 ILQWKDEFLFWN 92
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 134 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 223
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 134 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 223
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 174 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 320
+D D+P + L L+ + E + V + ++ W D RL+WN
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 96 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 260
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 261 TVRIQADLQMNWIDKRLSWNAGRVG 335
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 249 ESESTVRIQADLQMNWIDKRLSWN 320
E + ++ L +NW+D RLSWN
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWN 177
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 96 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 260
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 261 TVRIQADLQMNWIDKRLSWNAGRVG 335
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 96 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 260
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 261 TVRIQADLQMNWIDKRLSWNAGRVG 335
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 96 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 260
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 261 TVRIQADLQMNWIDKRLSWNAGRVG 335
V + A L W D L W+ G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,248
Number of Sequences: 27780
Number of extensions: 305256
Number of successful extensions: 1091
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -