Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_A23
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 41 1e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 35 8e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.001
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 34 0.001
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 34 0.001
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 34 0.002
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 34 0.002
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.003
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.006
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 32 0.006
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.007
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.013
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.040
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.053
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.070
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.070
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.12
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.16
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.21
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.21
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.21
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.28
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.65
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.65
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.65
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.65
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +2
Query: 413 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI--D 586
Y + NG V W+ + ++ + +P D QTC KFGS N D++ + +
Sbjct: 127 YKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNN 186
Query: 587 KRIYSM---FESGXWDV 628
K + ++SG WD+
Sbjct: 187 KNFVDLSDYWKSGTWDI 203
Score = 26.2 bits (55), Expect = 0.37
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANVRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 338
K+ VN L ++ NV E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
Score = 24.2 bits (50), Expect = 1.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 352 ERLWRPDVVLLNAA 393
+++W+PD+VL N A
Sbjct: 106 DKVWKPDIVLFNNA 119
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 41.1 bits (92), Expect = 1e-05
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 604
V ++GSVS + + + +WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.1 bits (82), Expect = 2e-04
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V NNG+ ++ + + + +P D Q C KFGS ++ ++D +
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQ 181
Query: 587 KR----IYSMFESGXWDVTG 634
I S +G WD+ G
Sbjct: 182 DEAGGDISSFITNGEWDLLG 201
Score = 25.4 bits (53), Expect = 0.65
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
Score = 24.2 bits (50), Expect = 1.5
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +3
Query: 75 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 233
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 234 VRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
V E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.7 bits (81), Expect = 3e-04
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANVRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H NV E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNA 314
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 25.4 bits (53), Expect = 0.65
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHNSDEM 571
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.1 bits (77), Expect = 8e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-VRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R + E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAG 317
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 352 ERLWRPDVVLLN 387
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 213 SETGGDLSDFITNGEWYLIG 232
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 213 SETGGDLSDFITNGEWYLIG 232
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 422 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
+A + G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAA 393
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 416 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
A +A + + G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 416 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
A +A ++ G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 126 ATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.5 bits (58), Expect = 0.16
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANVRESESTVRIQADLQMNWIDKR 299
++D++L YD P D VV + + +R + + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
Score = 30.3 bits (65), Expect = 0.023
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANVRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A + + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 587 KR----IYSMFESGXWDVTG 634
+ +G W + G
Sbjct: 145 SETGGDLSDFITNGEWYLIG 164
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NVRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+V E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 422 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
+A V +G V W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.040
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 422 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
+A + G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 124 KAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAA 393
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.1 bits (62), Expect = 0.053
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 446 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 586
++ ++ +L + +M +P+D Q C + S H +DEM F D
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.7 bits (61), Expect = 0.070
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +2
Query: 455 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
++ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 28.7 bits (61), Expect = 0.070
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAA 393
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 422 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 571
+ +G V RL + ++L+ +P D+Q C F S HN +M
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 547
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 574
VS+ G V W+ + + ++ +P D Q C K+ S ++ +++
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA 393
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 404 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
P +ALR + NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 404 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
P +ALR + NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 404 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
P +ALR + NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 212 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 404 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 580
P +ALR + NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 192 KIVVNLTLHLRHANVRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 359
+ ++N L + + V ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 360 V 362
+
Sbjct: 299 I 299
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 137 GQ*CCVFAFCRTSYSTSEEKPVTR 66
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,258
Number of Sequences: 438
Number of extensions: 5197
Number of successful extensions: 73
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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