Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_A14
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 40 0.009
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 39 0.027
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 39 0.027
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 38 0.035
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 38 0.035
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 38 0.035
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 38 0.035
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 38 0.035
X66403-1|CAA47030.1| 493|Homo sapiens acetylcholine receptor ep... 37 0.11
AF105999-1|AAD24503.1| 493|Homo sapiens acetylcholine receptor ... 37 0.11
X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for ... 36 0.14
BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor, n... 36 0.14
BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor, n... 36 0.14
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 36 0.25
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 36 0.25
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 36 0.25
BC113575-1|AAI13576.1| 479|Homo sapiens cholinergic receptor, n... 36 0.25
BC113549-1|AAI13550.1| 479|Homo sapiens cholinergic receptor, n... 36 0.25
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 36 0.25
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 36 0.25
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 36 0.25
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 36 0.25
AY123244-1|AAM74523.1| 479|Homo sapiens nicotinic acetylcholine... 36 0.25
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 36 0.25
AJ243342-1|CAB65091.1| 479|Homo sapiens nicotinic acetylcholine... 36 0.25
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 36 0.25
AF227732-1|AAF61920.1| 470|Homo sapiens nicotinic acetylcholine... 36 0.25
AC118275-1|AAY40986.1| 479|Homo sapiens unknown protein. 36 0.25
AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic acet... 34 0.76
AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic acet... 34 0.76
AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine... 34 0.76
AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine... 34 0.76
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 32 3.1
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 31 4.1
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 31 4.1
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 31 4.1
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 31 4.1
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 31 4.1
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 31 4.1
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 31 4.1
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 31 4.1
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 31 4.1
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 31 4.1
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 31 4.1
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 31 4.1
Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine r... 31 5.4
U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine r... 31 5.4
BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor, n... 31 5.4
AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic acet... 31 5.4
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.009
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +3
Query: 18 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---RES 182
LL A+ A+ N L+ D L+ YD P + VVN++L L N+ E
Sbjct: 11 LLLLAVCLGAQGRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNER 68
Query: 183 ESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E + ++M W D RL + G V S +WRPD+VL
Sbjct: 69 EEALTTNVWIEMQWCDYRLRWDPRDYEGLWVLRVPSTMVWRPDIVL 114
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.027
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---RESESTVRILADLQMNWIDKRLE 242
++ L+ YD P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
+ G V S +WRPD+VL
Sbjct: 92 WDPRDYEGLWVLRVPSTMVWRPDIVL 117
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.027
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---RESESTVRILADLQMNWIDKRLE 242
++ L+ YD P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
+ G V S +WRPD+VL
Sbjct: 92 WDPRDYEGLWVLRVPSTMVWRPDIVL 117
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 38.3 bits (85), Expect = 0.035
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 173
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 174 RESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E V L+ W+D L+ G + SE++WRPD+VL
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 38.3 bits (85), Expect = 0.035
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 173
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 174 RESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E V L+ W+D L+ G + SE++WRPD+VL
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 38.3 bits (85), Expect = 0.035
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 173
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 174 RESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E V L+ W+D L+ G + SE++WRPD+VL
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 38.3 bits (85), Expect = 0.035
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 173
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 174 RESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E V L+ W+D L+ G + SE++WRPD+VL
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 38.3 bits (85), Expect = 0.035
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 173
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 174 RESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
E V L+ W+D L+ G + SE++WRPD+VL
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
>X66403-1|CAA47030.1| 493|Homo sapiens acetylcholine receptor
epsilon subunit CHRNE protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 120 PDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSER 296
P+ + ++L + L + ++ E E T+ + ++W D RL G T V SE
Sbjct: 45 PEDTVTISLKVTLTNLISLNEKEETLTTSVWIGIDWQDYRLNYSKDDFGGIETLRVPSEL 104
Query: 297 LWRPDVVL 320
+W P++VL
Sbjct: 105 VWLPEIVL 112
>AF105999-1|AAD24503.1| 493|Homo sapiens acetylcholine receptor
epsilon subunit protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 120 PDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSER 296
P+ + ++L + L + ++ E E T+ + ++W D RL G T V SE
Sbjct: 45 PEDTVTISLKVTLTNLISLNEKEETLTTSVWIGIDWQDYRLNYSKDDFGGIETLRVPSEL 104
Query: 297 LWRPDVVL 320
+W P++VL
Sbjct: 105 VWLPEIVL 112
>X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor beta-subunit. ).
Length = 501
Score = 36.3 bits (80), Expect = 0.14
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 108 RESPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLV 284
RE ++ V L L L N ++ E + ++ DL+ W D RL G + +
Sbjct: 46 REVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDGIDSLRI 103
Query: 285 SSERLWRPDVVLL 323
++E +W PDVVLL
Sbjct: 104 TAESVWLPDVVLL 116
>BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.14
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 108 RESPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLV 284
RE ++ V L L L N ++ E + ++ DL+ W D RL G + +
Sbjct: 46 REVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDGIDSLRI 103
Query: 285 SSERLWRPDVVLL 323
++E +W PDVVLL
Sbjct: 104 TAESVWLPDVVLL 116
>BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.14
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 108 RESPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLV 284
RE ++ V L L L N ++ E + ++ DL+ W D RL G + +
Sbjct: 46 REVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDGIDSLRI 103
Query: 285 SSERLWRPDVVLL 323
++E +W PDVVLL
Sbjct: 104 TAESVWLPDVVLL 116
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>BC113575-1|AAI13576.1| 479|Homo sapiens cholinergic receptor,
nicotinic, alpha 9 protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 22 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 81
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 82 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 119
>BC113549-1|AAI13550.1| 479|Homo sapiens cholinergic receptor,
nicotinic, alpha 9 protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 22 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 81
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 82 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 119
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>AY123244-1|AAM74523.1| 479|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 9 protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 22 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 81
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 82 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 119
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>AJ243342-1|CAB65091.1| 479|Homo sapiens nicotinic acetylcholine
receptor alpha 9 subunit protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 22 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 81
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 82 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 119
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.25
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 30 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 188
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 189 TVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
+ L+ W D RL + G + + ++R+W PD+VL
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVL 117
>AF227732-1|AAF61920.1| 470|Homo sapiens nicotinic acetylcholine
receptor alpha 9 subunit protein.
Length = 470
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 16 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 75
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 76 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 113
>AC118275-1|AAY40986.1| 479|Homo sapiens unknown protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 42 AAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD-- 209
AAE + + + L Y P D+ V+N+TL + + I++ + +IL
Sbjct: 22 AAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYL 81
Query: 210 -LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + + S+ +WRPD+VL
Sbjct: 82 WIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVL 119
>AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic
acetylcholine receptor subunit4 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.76
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 45 AEC---ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD 209
AEC E +L L D L A Y P D+ +N+TL + + I + + ++L
Sbjct: 20 AECLGAEGRLALKLFRD-LFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERNQVLTL 78
Query: 210 ---LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + S +WRPD+VL
Sbjct: 79 YLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVL 118
>AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic
acetylcholine alpha10 subunit protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.76
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 45 AEC---ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD 209
AEC E +L L D L A Y P D+ +N+TL + + I + + ++L
Sbjct: 20 AECLGAEGRLALKLFRD-LFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERNQVLTL 78
Query: 210 ---LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + S +WRPD+VL
Sbjct: 79 YLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVL 118
>AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.76
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 45 AEC---ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD 209
AEC E +L L D L A Y P D+ +N+TL + + I + + ++L
Sbjct: 20 AECLGAEGRLALKLFRD-LFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERNQVLTL 78
Query: 210 ---LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + S +WRPD+VL
Sbjct: 79 YLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVL 118
>AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.76
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Frame = +3
Query: 45 AEC---ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD 209
AEC E +L L D L A Y P D+ +N+TL + + I + + ++L
Sbjct: 20 AECLGAEGRLALKLFRD-LFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERNQVLTL 78
Query: 210 ---LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
++ W D L G + S +WRPD+VL
Sbjct: 79 YLWIRQEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVL 118
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
L+ W D +L+ G G V ++++W+PD+VL
Sbjct: 84 LKQIWNDYKLKWNPSGYGGAEFMRVPAQKIWKPDIVL 120
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 51 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL-----RHANIRESESTVRILADLQ 215
C + + L + Y++ P + +T+H + AN+ E + L+
Sbjct: 28 CVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLR 87
Query: 216 MNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
W D +L G T V ++++W+PD+VL
Sbjct: 88 HIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVL 122
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 132 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRP 308
I + L L L ++ E + + L+ W D RL + G + + ++R+W P
Sbjct: 7 ISIKLQLSLAQLISVNERDEIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 66
Query: 309 DVVL 320
D+VL
Sbjct: 67 DIVL 70
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 46 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 84
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 51 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL-----RHANIRESESTVRILADLQ 215
C + + L + Y++ P + +T+H + AN+ E + L+
Sbjct: 28 CVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLR 87
Query: 216 MNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
W D +L G T V ++++W+PD+VL
Sbjct: 88 HIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVL 122
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 51 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL-----RHANIRESESTVRILADLQ 215
C + + L + Y++ P + +T+H + AN+ E + L+
Sbjct: 28 CVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLR 87
Query: 216 MNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
W D +L G T V ++++W+PD+VL
Sbjct: 88 HIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVL 122
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 210 LQMNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVLLK 326
L+ W D +L G + V SE LW PD+VL +
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFE 119
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 51 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL-----RHANIRESESTVRILADLQ 215
C + + L + Y++ P + +T+H + AN+ E + L+
Sbjct: 28 CVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLR 87
Query: 216 MNWIDKRLEXGTQGEWGCSTWLVSSERLWRPDVVL 320
W D +L G T V ++++W+PD+VL
Sbjct: 88 HIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVL 122
>Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLE 242
++ L Y+R P + KI + L + ++ E + L+ WID +L
Sbjct: 50 LLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLR 109
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
G V S+ +W PD+VL
Sbjct: 110 WNPDDYGGIKVIRVPSDSVWTPDIVL 135
>U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLE 242
++ L Y+R P + KI + L + ++ E + L+ WID +L
Sbjct: 50 LLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLR 109
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
G V S+ +W PD+VL
Sbjct: 110 WNPDDYGGIKVIRVPSDSVWTPDIVL 135
>BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor,
nicotinic, alpha 5 protein.
Length = 468
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLE 242
++ L Y+R P + KI + L + ++ E + L+ WID +L
Sbjct: 50 LLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLR 109
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
G V S+ +W PD+VL
Sbjct: 110 WNPDDYGGIKVIRVPSDSVWTPDIVL 135
>AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-5subunit protein.
Length = 468
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLE 242
++ L Y+R P + KI + L + ++ E + L+ WID +L
Sbjct: 50 LLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLR 109
Query: 243 XGTQGEWGCSTWLVSSERLWRPDVVL 320
G V S+ +W PD+VL
Sbjct: 110 WNPDDYGGIKVIRVPSDSVWTPDIVL 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,545,198
Number of Sequences: 237096
Number of extensions: 1541900
Number of successful extensions: 3356
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3352
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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