Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_A12
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.2  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
 Frame = +1

Query: 451 CLGTEENG-AAFHSISSYRPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYXRHLQ 627
           C  T   G   + S+ S+  PLL  +  Y  I+     A  RR R   RQ  +     +Q
Sbjct: 188 CQLTRRQGYVIYSSLGSFFIPLLLMSLVYLEIYL----ATRRRLRERARQSRINA---VQ 240

Query: 628 RVRHHHANCLCLX**FFNITSTSCSPRXGTPFSTPFSHIQKKVVKXGSSXXXLGTGGT 801
             RH  A+         +   +  S       STP SH +  ++    +   +G GGT
Sbjct: 241 STRHREAD---------DAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGT 289


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
 Frame = +1

Query: 451 CLGTEENG-AAFHSISSYRPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYXRHLQ 627
           C  T   G   + S+ S+  PLL  +  Y  I+     A  RR R   RQ  +     +Q
Sbjct: 188 CQLTRRQGYVIYSSLGSFFIPLLLMSLVYLEIYL----ATRRRLRERARQSRINA---VQ 240

Query: 628 RVRHHHANCLCLX**FFNITSTSCSPRXGTPFSTPFSHIQKKVVKXGSSXXXLGTGGT 801
             RH  A+         +   +  S       STP SH +  ++    +   +G GGT
Sbjct: 241 STRHREAD---------DAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGT 289


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
 Frame = +1

Query: 451 CLGTEENG-AAFHSISSYRPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYXRHLQ 627
           C  T   G   + S+ S+  PLL  +  Y  I+     A  RR R   RQ  +     +Q
Sbjct: 188 CQLTRRQGYVIYSSLGSFFIPLLLMSLVYLEIYL----ATRRRLRERARQSRINA---VQ 240

Query: 628 RVRHHHANCLCLX**FFNITSTSCSPRXGTPFSTPFSHIQKKVVKXGSSXXXLGTGGT 801
             RH  A+         +   +  S       STP SH +  ++    +   +G GGT
Sbjct: 241 STRHREAD---------DAEESVSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGT 289


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +1

Query: 481 FHSISSYRPPLLHQNQHYKSIWTFDLHAPYRRARHL*RQHGLQYXRHLQRVRHHH 645
           + S + + PP  H +QH+ S      H     + H   QHG           HHH
Sbjct: 305 YPSTAGFLPPSYHPHQHHPS----QYHPHRGSSPH--HQHGNHTMGPTMGPPHHH 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,548
Number of Sequences: 438
Number of extensions: 4487
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)