Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_A05
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   1.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   5.8  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 144 QKEKGREGCGCCEIRNHR*TFRSNYQYDYHHGYQY 248
           ++E+ RE      + N      +NY+Y+Y++ Y Y
Sbjct: 72  ERERSREPKIISSLSNKTIHNNNNYKYNYNNKYNY 106


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 231 HHGYQYTWTK*IYWSSAFTTLP*AITKTFRT 323
           H+G +  WTK IY    F  LP  +T    T
Sbjct: 246 HNGGEIAWTKVIY-VKRFFGLPVGVTAAIPT 275



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 553 LGQEVGYSIRFEDCSGATNTSKIHDRRYVAK 645
           +G+ VGY I     +     + +HD  Y A+
Sbjct: 151 VGRNVGYKIPITKLTAMGVLNNLHDPEYSAR 181


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 231 HHGYQYTWTK*IYWSSAFTTLP*AITKTFRT 323
           H+G +  WTK IY    F  LP  +T    T
Sbjct: 246 HNGGEIAWTKVIY-VKRFFGLPVGVTAAIPT 275



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 553 LGQEVGYSIRFEDCSGATNTSKIHDRRYVAK 645
           +G+ VGY I     +     + +HD  Y A+
Sbjct: 151 VGRNVGYKIPITKLTAMGVLNNLHDPEYSAR 181


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 231 HHGYQYTWTK*IYWSSAFTTLP*AITKTFRT 323
           H+G +  WTK IY    F  LP  +T    T
Sbjct: 246 HNGGEIAWTKVIY-VKRFFGLPVGVTAAIPT 275



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 553 LGQEVGYSIRFEDCSGATNTSKIHDRRYVAK 645
           +G+ VGY I     +     + +HD  Y A+
Sbjct: 151 VGRNVGYKIPITKLTAMGVLNNLHDPEYSAR 181


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 369 SPMYSARRRNRVREDYPDPPVVCRVCCSKWPRQG*RRGLYSTKTSGC 509
           +P  S     RV  ++    V+CRVC  K    G   G++S +  GC
Sbjct: 45  APQDSENLLGRVLAEFDGTTVLCRVCGDK--ASGFHYGVHSCE--GC 87


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +1

Query: 580 RFEDCSGATNTSKI----HDRRYVAKRGYV 657
           ++EDCSG  +  KI    ++R +V   G V
Sbjct: 119 KYEDCSGIVSAHKIAIDEYERLWVLDSGLV 148


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +1

Query: 580 RFEDCSGATNTSKI----HDRRYVAKRGYV 657
           ++EDCSG  +  KI     DR +V   G V
Sbjct: 120 KYEDCSGIVSAFKIAVDKFDRLWVLDSGLV 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,536
Number of Sequences: 438
Number of extensions: 4879
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)