Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_P23
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   306   2e-83
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   306   2e-83
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   306   2e-83
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   306   2e-83
BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   299   2e-81

>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  306 bits (752), Expect = 2e-83
 Identities = 152/230 (66%), Positives = 171/230 (74%)
 Frame = -2

Query: 760 IQXNGGTXEDQSELXQRTFWRTFSXNXSLWILGCPR*NDDCIGVTKXKGYKXSXXXXXXI 581
           IQ NGG+ ED+ +  +    +    +    + G      DC+GVTK KG+K         
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSN---VFGQDE-MIDCVGVTKGKGFKGVTSRWHTK 238

Query: 580 NRRDSLVTXPXRXICIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKV 401
                      +  CIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKV
Sbjct: 239 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV 298

Query: 400 IKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSLRVHTKRA 221
           IKNNASTEYDL++KSITPMGGFPHYGEVNNDFV+IKGCC+G KKRIITLRKSL  HTKR+
Sbjct: 299 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRS 358

Query: 220 ALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 71
           ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 359 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  306 bits (752), Expect = 2e-83
 Identities = 152/230 (66%), Positives = 171/230 (74%)
 Frame = -2

Query: 760 IQXNGGTXEDQSELXQRTFWRTFSXNXSLWILGCPR*NDDCIGVTKXKGYKXSXXXXXXI 581
           IQ NGG+ ED+ +  +    +    +    + G      DC+GVTK KG+K         
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSN---VFGQDE-MIDCVGVTKGKGFKGVTSRWHTK 225

Query: 580 NRRDSLVTXPXRXICIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKV 401
                      +  CIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKV
Sbjct: 226 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV 285

Query: 400 IKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSLRVHTKRA 221
           IKNNASTEYDL++KSITPMGGFPHYGEVNNDFV+IKGCC+G KKRIITLRKSL  HTKR+
Sbjct: 286 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRS 345

Query: 220 ALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 71
           ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 346 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  306 bits (752), Expect = 2e-83
 Identities = 152/230 (66%), Positives = 171/230 (74%)
 Frame = -2

Query: 760 IQXNGGTXEDQSELXQRTFWRTFSXNXSLWILGCPR*NDDCIGVTKXKGYKXSXXXXXXI 581
           IQ NGG+ ED+ +  +    +    +    + G      DC+GVTK KG+K         
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSN---VFGQDE-MIDCVGVTKGKGFKGVTSRWHTK 225

Query: 580 NRRDSLVTXPXRXICIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKV 401
                      +  CIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKV
Sbjct: 226 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV 285

Query: 400 IKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSLRVHTKRA 221
           IKNNASTEYDL++KSITPMGGFPHYGEVNNDFV+IKGCC+G KKRIITLRKSL  HTKR+
Sbjct: 286 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRS 345

Query: 220 ALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 71
           ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 346 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  306 bits (752), Expect = 2e-83
 Identities = 152/230 (66%), Positives = 171/230 (74%)
 Frame = -2

Query: 760 IQXNGGTXEDQSELXQRTFWRTFSXNXSLWILGCPR*NDDCIGVTKXKGYKXSXXXXXXI 581
           IQ NGG+ ED+ +  +    +    +    + G      DC+GVTK KG+K         
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSN---VFGQDE-MIDCVGVTKGKGFKGVTSRWHTK 238

Query: 580 NRRDSLVTXPXRXICIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKV 401
                      +  CIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKV
Sbjct: 239 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV 298

Query: 400 IKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSLRVHTKRA 221
           IKNNASTEYDL++KSITPMGGFPHYGEVNNDFV+IKGCC+G KKRIITLRKSL  HTKR+
Sbjct: 299 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRS 358

Query: 220 ALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 71
           ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT  A
Sbjct: 359 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408


>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  299 bits (735), Expect = 2e-81
 Identities = 148/224 (66%), Positives = 167/224 (74%)
 Frame = -2

Query: 760 IQXNGGTXEDQSELXQRTFWRTFSXNXSLWILGCPR*NDDCIGVTKXKGYKXSXXXXXXI 581
           IQ NGG+ ED+ +  +    +    +    + G      DC+GVTK KG+K         
Sbjct: 194 IQLNGGSIEDKVKWAREHLEKPIQVSN---VFGQDE-MIDCVGVTKGKGFKGVTSRWHTK 249

Query: 580 NRRDSLVTXPXRXICIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKV 401
                      +  CIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKV
Sbjct: 250 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKV 309

Query: 400 IKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSLRVHTKRA 221
           IKNNASTEYDL++KSITPMGGFPHYGEVNNDFV+IKGCC+G KKRIITLRKSL  HTKR+
Sbjct: 310 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRS 369

Query: 220 ALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
           ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 370 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,533,365
Number of Sequences: 53049
Number of extensions: 716760
Number of successful extensions: 1914
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1909
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)