Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_P21
         (1135 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            33   0.020
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 32.7 bits (71), Expect = 0.020
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 539 GGKXXXPPPPPPGGXXXXTPP 477
           GG    PPPPPPGG     PP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPP 545



 Score = 28.7 bits (61), Expect = 0.33
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 537 GEXXXPPPPPPXGXEXXNPPP 475
           G    PPPPPP G    N PP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPP 545



 Score = 25.4 bits (53), Expect = 3.1
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 522 PPPPPPXGXEXXNPPPS 472
           PPPPPP G     PPPS
Sbjct: 585 PPPPPPMG-----PPPS 596


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 475 GGGVXXLXPPGGGGGG 522
           GGG      PGGGGGG
Sbjct: 215 GGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.154    0.536 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,106
Number of Sequences: 2352
Number of extensions: 8144
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)