Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_P14
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.021
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.021
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.021
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.46
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.46
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.81
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.81
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.81
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 3.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.3
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 5.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 5.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 5.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 5.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 5.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 5.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 7.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 24 8.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 24 8.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 9.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 27 9.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +3
Query: 303 PPXPGG-PXXXNXXPXXXXXGXXPXXGGGXIPPX----GVXPPPPXXPGGVXK 446
PP PGG P P G P GG PP G PPPP P G K
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/97 (31%), Positives = 32/97 (32%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGGVXKXXXXGGXXLXXX 482
PP GGP P P GG P G PPPP PGG+ GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGL--PPISGGP----- 758
Query: 483 XFFXXXXXXXGGXKKXXXXGXXPPPPXFFXGGEXTPP 593
GG PPPP F GG PP
Sbjct: 759 ---PPPPPPPGGCPPP----PPPPPPGGFKGGPPPPP 788
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 273 PPFKXPXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPG 434
PP P PP GGP P P GG G PPPP PG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KG-GPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +3
Query: 303 PPXPGG-PXXXNXXPXXXXXGXXPXXGGGXIPPX----GVXPPPPXXPGGVXK 446
PP PGG P P G P GG PP G PPPP P G K
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/97 (31%), Positives = 32/97 (32%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGGVXKXXXXGGXXLXXX 482
PP GGP P P GG P G PPPP PGG+ GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGL--PPISGGP----- 758
Query: 483 XFFXXXXXXXGGXKKXXXXGXXPPPPXFFXGGEXTPP 593
GG PPPP F GG PP
Sbjct: 759 ---PPPPPPPGGCPPP----PPPPPPGGFKGGPPPPP 788
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 273 PPFKXPXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPG 434
PP P PP GGP P P GG G PPPP PG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KG-GPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +3
Query: 303 PPXPGG-PXXXNXXPXXXXXGXXPXXGGGXIPPX----GVXPPPPXXPGGVXK 446
PP PGG P P G P GG PP G PPPP P G K
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/97 (31%), Positives = 32/97 (32%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGGVXKXXXXGGXXLXXX 482
PP GGP P P GG P G PPPP PGG+ GG
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-PPGGL--PPISGGP----- 341
Query: 483 XFFXXXXXXXGGXKKXXXXGXXPPPPXFFXGGEXTPP 593
GG PPPP F GG PP
Sbjct: 342 ---PPPPPPPGGCPPP----PPPPPPGGFKGGPPPPP 371
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 273 PPFKXPXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPG 434
PP P PP GGP P P GG G PPPP PG
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KG-GPPPPPPPG 374
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 436 PPGXXGGGGXT--PXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
PP GGGG P GG PP G G + GPPG GG
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQ---GGPPGHGG 197
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGG-XXPPPXXG 368
PP PPG G GG GG PPP G
Sbjct: 174 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQG 206
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 436 PPGXXGGGGXT--PXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
PP GGGG P GG PP G G + GPPG GG
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQ---GGPPGHGG 477
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGG-XXPPPXXG 368
PP PPG G GG GG PPP G
Sbjct: 454 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQG 486
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGG----PXXXNXXPXXXXXGXXPXXGGGXIPPXGVXP 413
PP PP PP G P + P P GG PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 414 PPPXXPGG 437
PPP P G
Sbjct: 298 PPPPPPRG 305
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGGXXPPPXXGXXP 359
PP + PP G P GG PPP G P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 221 PETKRGSKPPFPXXMGKTPX*XPXXLKXPXPWGAPKXKFXXXXXXXGVXPXXGGGXXSPX 400
P GS PP P P P P G+P + P GG P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--------PTGSLPPPQAGGSPPPA 324
Query: 401 GXXSPPP 421
G SPPP
Sbjct: 325 GTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGG----PXXXNXXPXXXXXGXXPXXGGGXIPPXGVXP 413
PP PP PP G P + P P GG PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 414 PPPXXPGG 437
PPP P G
Sbjct: 319 PPPPPPRG 326
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGGXXPPPXXGXXP 359
PP + PP G P GG PPP G P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 221 PETKRGSKPPFPXXMGKTPX*XPXXLKXPXPWGAPKXKFXXXXXXXGVXPXXGGGXXSPX 400
P GS PP P P P P G+P + P GG P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--------PTGSLPPPQAGGSPPPA 345
Query: 401 GXXSPPP 421
G SPPP
Sbjct: 346 GTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGG----PXXXNXXPXXXXXGXXPXXGGGXIPPXGVXP 413
PP PP PP G P + P P GG PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 414 PPPXXPGG 437
PPP P G
Sbjct: 304 PPPPPPRG 311
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGGXXPPPXXGXXP 359
PP + PP G P GG PPP G P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 221 PETKRGSKPPFPXXMGKTPX*XPXXLKXPXPWGAPKXKFXXXXXXXGVXPXXGGGXXSPX 400
P GS PP P P P P G+P + P GG P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--------PTGSLPPPQAGGSPPPA 330
Query: 401 GXXSPPP 421
G SPPP
Sbjct: 331 GTGSPPP 337
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/63 (36%), Positives = 24/63 (38%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPX 425
PPS F + P P PP PGGP P GG P G PPPP
Sbjct: 393 PPSAFGAPQGP-GGPGGYGPPPPGGPGAPG--------SYGPPQGG----PGGFGPPPPG 439
Query: 426 XPG 434
PG
Sbjct: 440 GPG 442
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 249 PSXFXWXKPPFKX-PXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPX 425
P F PP P PP GP P G GG P G PPPP
Sbjct: 361 PQSFGGPPPPVSSAPGNFAPPPQSGPPGA-FAPPPSAFGAPQGPGG----PGGYGPPPPG 415
Query: 426 XPG 434
PG
Sbjct: 416 GPG 418
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGGV 440
PP PGGP + P P G P V PP P P G+
Sbjct: 232 PPGPGGPPGQDGHPGDAGAPGAP--GQVVAGPGSVGPPGPQGPPGL 275
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGGPXXXNXXPXXXXX-----GXXPXXGGGXIPPXGVX 410
PPS W PP P P PG P P G P G P G+
Sbjct: 290 PPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 411 PPPP 422
PPPP
Sbjct: 349 PPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Frame = +3
Query: 246 PPSXFXWXKPPFKXPXF*XPPXPGGPXXXNXXPXXXXX-----GXXPXXGGGXIPPXGVX 410
PPS W PP P P PG P P G P G P G+
Sbjct: 300 PPSSGMWPPPPPPPPGR-TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 411 PPPP 422
PPPP
Sbjct: 359 PPPP 362
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPG 434
PP P GP N P P G PP G P PP PG
Sbjct: 182 PPGPPGPDG-NAGPAGAPGVPGPDGDAGSPPPPG-PPGPPGPPG 223
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGG 437
PP P GP + P P GG P PP P G
Sbjct: 276 PPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAG 320
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPP-PPXXPG 434
P P GP P P GG PP P PP PG
Sbjct: 154 PDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPG 198
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 306 PXPGGPXXXNXX---PXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGG 437
P P GP P P GG PP PPP PGG
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 306 PXPGGPXXXNXX---PXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGG 437
P P GP P P GG PP PPP PGG
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 462 GXXLXXXXFFXXXXXXXGGXKKXXXXGXXPPPPXFFXGGEXTPP 593
G + FF G G PPPP F GG PP
Sbjct: 55 GQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPP 98
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +3
Query: 249 PSXFXWXKPPFKXPXF*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVX-PPPPX 425
P + PP PP PGG P GG PP PPPP
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Query: 426 XPGGV 440
P G+
Sbjct: 119 PPSGL 123
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGGV 440
PP P P G P G P G+ PPPP GG+
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPG----PGGIPPPPPMFAGGI 94
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXG--GGXIPPXGVXPPPPXXPGGVXKXXXXGG 464
PP P GP + P P GG P PP P P G GG
Sbjct: 187 PPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXG--GGXIPPXGVXPPPPXXPGGVXKXXXXGG 464
PP P GP + P P GG P PP P P G GG
Sbjct: 187 PPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 306 PXPGGPXXXNXX---PXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGG 437
P P GP P P GG PP PPP PGG
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXG--GGXIPPXGVXPPPPXXPGGVXKXXXXGG 464
PP P GP + P P GG P PP P P G GG
Sbjct: 187 PPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXG--GGXIPPXGVXPPPPXXPGGVXKXXXXGG 464
PP P GP + P P GG P PP P P G GG
Sbjct: 187 PPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 306 PXPGGPXXXNXX---PXXXXXGXXPXXGGGXIPPXGVXPPPPXXPGG 437
P P GP P P GG PP PPP PGG
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 294 F*XPPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPP-PPXXPGGVXKXXXXGG 464
F PP P GP N P G P G PP PP PGG GG
Sbjct: 167 FDCPPGPAGPAG-NAGPPGAPGG--PGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGG 221
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 433 PGXXGGGGXTPXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
PG G G TP GG PP P + G PG G
Sbjct: 186 PGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPG 229
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 463 PPXXKXFXTPPGXXGGGGXTPXGGXXPPP 377
PP + P G GGGG G PPP
Sbjct: 71 PPFDGGYNRPYGGGGGGGYGRPQGYVPPP 99
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -2
Query: 445 FXTPPGXXG-GGGXTPXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
F P G G GG P G PP G G + GPPG GG
Sbjct: 142 FDCPVGPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPR----GPPGPGG 186
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 540 GXXPPPPXFFXGGEXTPP 593
G PPPP F G PP
Sbjct: 302 GHFPPPPPHFMGRGMPPP 319
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPP 422
P P GP P P G PP G PPPP
Sbjct: 272 PHHPYGPPHPMHHPYAMMP---PPFGFFPPPPRGHFPPPP 308
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 540 GXXPPPPXFFXGGEXTPP 593
G PPPP F G PP
Sbjct: 302 GHFPPPPPHFMGRGMPPP 319
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 303 PPXPGGPXXXNXXPXXXXXGXXPXXGGGXIPPXGVXPPPP 422
P P GP P P G PP G PPPP
Sbjct: 272 PHHPYGPPHPMHHPYAMMP---PPFGFFPPPPRGHFPPPP 308
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 436 PPGXXGGGGXTPXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
PPG G G P GG P P F G P GG
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGG 225
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 436 PPGXXGGGGXTPXGGXXPPPXXGXXPXXXXXGXKFXFXGPPGXGG 302
PPG G G TP GG P P G PG G
Sbjct: 191 PPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPG 235
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Frame = +3
Query: 249 PSXFXWXKPPFKXPXF*X-PPXPGGPXXXNXXPXXXXXGXX----PXXGGGXIPPXGVXP 413
PS + P + P PP GG P G P GG P G+ P
Sbjct: 1541 PSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPP 1600
Query: 414 PPPXXPGG 437
P P P G
Sbjct: 1601 PGPPPPNG 1608
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,838,855
Number of Sequences: 27780
Number of extensions: 193669
Number of successful extensions: 1015
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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