Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_P13
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...   116   2e-26
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    95   6e-20
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    31   0.85 

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score =  116 bits (278), Expect = 2e-26
 Identities = 71/186 (38%), Positives = 95/186 (51%)
 Frame = -1

Query: 693 TRVXKGQIMIGSALFPKGVKGNVXDSFARHALWEXXXXXXXXXXXXXXXXLNVHEGPSGV 514
           T V KG I +  A FP G+ G+  D+  R ALW+                LNVHEGP G+
Sbjct: 443 TLVLKGHINLARAKFPDGIYGSRLDTLTRDALWKLGLDFEHGTGHGVGHYLNVHEGPIGI 502

Query: 513 SWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDHPKAKNLRGDYDG 334
             R  P    L+  Q+L+ EPGFY   +YGIR E+  E V     S   KA+N       
Sbjct: 503 GHRSVPTGGELHASQVLTIEPGFYAKEKYGIRIENCYETVEAVVMS---KAQNF------ 553

Query: 333 RGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLLKDLEWLE 154
              L F +LTLVP Q   +D  +L + EI+++N YH RVL  +   L++RG   +L+WL 
Sbjct: 554 ---LTFKSLTLVPIQTSIVDKSLLIEEEINWLNQYHARVLKEVGEHLQKRGKTDELKWLA 610

Query: 153 GQCIPI 136
             C PI
Sbjct: 611 EACKPI 616


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
 Frame = -1

Query: 711  EQRDAFTRVXKGQIMIGSALFPKGVK-GNVXDSFARHALWEXXXXXXXXXXXXXXXXLNV 535
            E  + +T V KG I + SA FPK +  G+  D FAR ALW+                LN+
Sbjct: 881  EFMNQYTLVLKGHIRLASASFPKTLTYGSRLDIFARIALWDAGLDYDHETGHSVGHFLNI 940

Query: 534  HEGPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHEDLIEIVAVDKGSDHPKAKN 355
             +    +   PY  +  +  GQ+++ EPG+Y  G YGIR  +  E V V           
Sbjct: 941  RDTQIVIGREPYSSNSIIEAGQVMTIEPGYYSEGMYGIRIGNCYETVDVTLSQ------- 993

Query: 354  LRGDYDGRGVLGFSTLTLVPNQRECIDAEILTDFEISYVNAYHRRVLDTLSPILKERGLL 175
                 + +  L F  LTL+P Q   ++ ++LT  EI+++N YH +V   +  IL++   +
Sbjct: 994  -----NDQYFLRFEPLTLIPIQTSIVNKDLLTSEEINWLNKYHFKVFSKIGYILRKENRM 1048

Query: 174  KDLEWLEGQCIPI 136
            ++ +WL   C PI
Sbjct: 1049 EEYDWLFNACQPI 1061


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
            protein Y47D3A.29 protein.
          Length = 1428

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 441  KVGEYGIRHEDLIEIVAVDKGSDHP 367
            K G++ +RH D++E V  + G+D+P
Sbjct: 1128 KSGKFNLRHNDIVEYVICEDGTDNP 1152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,741
Number of Sequences: 27780
Number of extensions: 301811
Number of successful extensions: 832
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)