Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_P04
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 32 2.6
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 32 2.6
BC015626-1|AAH15626.1| 345|Homo sapiens par-6 partitioning defe... 30 7.9
AJ277095-1|CAB85490.1| 346|Homo sapiens PAR-6 protein protein. 30 7.9
AF265565-1|AAF75548.1| 345|Homo sapiens PAR6 protein. 30 7.9
AF252292-1|AAF71529.1| 345|Homo sapiens PAR6C protein. 30 7.9
AF028827-1|AAB84252.1| 231|Homo sapiens Tax interaction protein... 30 7.9
AB043634-1|BAA96235.1| 346|Homo sapiens PAR-6 protein. 30 7.9
AB041642-1|BAB16105.1| 345|Homo sapiens PAR-6 protein. 30 7.9
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 664 NPXFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PXSSEAPSAYLTPSSLGMAKGVSPP 491
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 664 NPXFHTPTTPDLTSISINPLTPY*KEFAPGLKP-PXSSEAPSAYLTPSSLGMAKGVSPP 491
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC015626-1|AAH15626.1| 345|Homo sapiens par-6 partitioning
defective 6 homolog alpha (C. elegans) protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 121 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 180
Query: 560 VIRG 549
+G
Sbjct: 181 APQG 184
>AJ277095-1|CAB85490.1| 346|Homo sapiens PAR-6 protein protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 122 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 181
Query: 560 VIRG 549
+G
Sbjct: 182 APQG 185
>AF265565-1|AAF75548.1| 345|Homo sapiens PAR6 protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 121 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 180
Query: 560 VIRG 549
+G
Sbjct: 181 APQG 184
>AF252292-1|AAF71529.1| 345|Homo sapiens PAR6C protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 121 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 180
Query: 560 VIRG 549
+G
Sbjct: 181 APQG 184
>AF028827-1|AAB84252.1| 231|Homo sapiens Tax interaction protein 40
protein.
Length = 231
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 7 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 66
Query: 560 VIRG 549
+G
Sbjct: 67 APQG 70
>AB043634-1|BAA96235.1| 346|Homo sapiens PAR-6 protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 122 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 181
Query: 560 VIRG 549
+G
Sbjct: 182 APQG 185
>AB041642-1|BAB16105.1| 345|Homo sapiens PAR-6 protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 728 VSPLXIKPPF----PXDFGYINXIIKSXIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASV 561
V+PL +PP P DF ++ +I + H R+ +H H S + +R G+ V
Sbjct: 121 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV 180
Query: 560 VIRG 549
+G
Sbjct: 181 APQG 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,001,286
Number of Sequences: 237096
Number of extensions: 2146778
Number of successful extensions: 4963
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4961
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -