Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_O16
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 33 1.1
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 33 1.1
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 33 1.1
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 31 4.5
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 31 4.5
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 31 4.5
BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein. 30 7.8
BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein. 30 7.8
AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens ... 30 7.8
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -1
Query: 734 MGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTPY*KEFAPG-----LK 570
+G S P+P +S TST SS P T TT TS++ TP ++ P
Sbjct: 256 VGASTPTTSSPAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVAT 314
Query: 569 PPLSSEAPSAYLTP 528
P +S P+ TP
Sbjct: 315 PTVSVSTPAPTATP 328
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -1
Query: 734 MGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTPY*KEFAPG-----LK 570
+G S P+P +S TST SS P T TT TS++ TP ++ P
Sbjct: 256 VGASTPTTSSPAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVAT 314
Query: 569 PPLSSEAPSAYLTP 528
P +S P+ TP
Sbjct: 315 PTVSVSTPARTATP 328
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -1
Query: 734 MGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTPY*KEFAPG-----LK 570
+G S P+P +S TST SS P T TT TS++ TP ++ P
Sbjct: 260 VGASTPTTSSPAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVAT 318
Query: 569 PPLSSEAPSAYLTP 528
P +S P+ TP
Sbjct: 319 PTVSVSTPAPTATP 332
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 704 PSPXI-SGTSTRSSNPRFXTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 552
P P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 704 PSPXI-SGTSTRSSNPRFXTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 552
P P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 180 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 704 PSPXI-SGTSTRSSNPRFXTPTTPDLTS----ISINPLTPY*KEFAPGLKPPLSSE 552
P P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein.
Length = 519
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 740 HNMGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTP 600
H++ + + PPSP I G S S +P T+P T+ + +P
Sbjct: 118 HDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSP 164
>BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein.
Length = 561
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 740 HNMGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTP 600
H++ + + PPSP I G S S +P T+P T+ + +P
Sbjct: 118 HDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSP 164
>AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ90251 fis, clone NT2RM4000115. ).
Length = 561
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 740 HNMGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTP 600
H++ + + PPSP I G S S +P T+P T+ + +P
Sbjct: 118 HDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSP 164
>AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ14803 fis, clone NT2RP4001442. ).
Length = 561
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 740 HNMGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTP 600
H++ + + PPSP I G S S +P T+P T+ + +P
Sbjct: 118 HDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSP 164
>AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ14772 fis, clone NT2RP3004332. ).
Length = 203
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -1
Query: 740 HNMGVSPLCIKPPSPXISGTSTRSSNPRFXTPTTPDLTSISINPLTP 600
H++ + + PPSP I G S S +P T+P T+ + +P
Sbjct: 118 HDLAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSP 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,442,276
Number of Sequences: 237096
Number of extensions: 2103535
Number of successful extensions: 5666
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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