Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_O01
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.5  
12_02_1174 - 26696869-26698191                                         29   6.2  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    29   6.2  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/76 (23%), Positives = 19/76 (25%)
 Frame = +3

Query: 468 PXPTARXSPPEXXXXSLHXXXXPXPXXXPXSXXXXXXXXPPXPXTPPXXXXXGXPXXAXX 647
           P P     PP     +      P P   P          PP P  PP       P     
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623

Query: 648 XAPXSXXXALXPPXXP 695
             P      L PP  P
Sbjct: 624 PPPLPNHSVLPPPPPP 639


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 23/96 (23%), Positives = 23/96 (23%)
 Frame = +1

Query: 550 PXXPPXHXXQXXPXXPXPPPXPXXXXXXGXXXXXXPXAXXXXXXLPXNPPXXXXXSXXXP 729
           P  PP    Q  P  P PPP P             P         P  PP     S   P
Sbjct: 138 PHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPK----PQPPPSLQPPSPPPP 193

Query: 730 TXPXXLXXSXXVSPXXXXPXPXXPXPXAHXPXXNSP 837
                      V      P P  P P    P    P
Sbjct: 194 PPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVP 229


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 550 PXXPPXHXXQXXPXXPXPPPXP 615
           P  PP H  +  P  P PPP P
Sbjct: 153 PPPPPDHVLKKVPSHPSPPPPP 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.310    0.136    0.452 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,802,941
Number of Sequences: 37544
Number of extensions: 196048
Number of successful extensions: 310
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)