Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_N16
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 31 1.2
11_06_0610 - 25449085-25453284 30 2.0
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 30 2.0
09_04_0506 - 18188785-18190599 30 2.7
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.7
06_01_0486 - 3455030-3455770 30 2.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.7
03_01_0515 - 3864796-3865425 30 2.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.5
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 28 8.2
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 28 8.2
09_02_0543 + 10427321-10428315,10428440-10429154 28 8.2
05_01_0380 + 2978256-2979284 28 8.2
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 8.2
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 28 8.2
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +2
Query: 635 PPXPXXAPXIPXXXXXIXCPXXXSVGXSXVXXXGVSQXXRPPPXPPXXXXPPPXXXNRXP 814
PP P AP P I P + +S PP PP PPP + P
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFP 131
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/73 (26%), Positives = 21/73 (28%)
Frame = +1
Query: 616 PXSALLPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPP 795
P +LP P PP P P P P PP +P P
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILP-PPPVKSPPPPAPVISPPPPV 1213
Query: 796 XSQPXPXXXXXPP 834
S P P PP
Sbjct: 1214 KSPPPPAPVILPP 1226
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/92 (22%), Positives = 24/92 (26%)
Frame = +1
Query: 559 PXXRAXXSIXXPXXXXXXAPXSALLPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRX 738
P A + P P + P P PP P P P
Sbjct: 1152 PPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISP-P 1210
Query: 739 XPXTXTPPXSPXXXXXXPPXSQPXPXXXXXPP 834
P PP +P P S P P PP
Sbjct: 1211 PPVKSPPPPAPVILPPPPVKSPPPPAPVISPP 1242
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/88 (23%), Positives = 23/88 (26%)
Frame = +1
Query: 571 AXXSIXXPXXXXXXAPXSALLPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXT 750
A S+ P P P P PP P P P P
Sbjct: 1124 ATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISP-PPPVK 1182
Query: 751 XTPPXSPXXXXXXPPXSQPXPXXXXXPP 834
PP +P P S P P PP
Sbjct: 1183 SPPPPAPVILPPPPVKSPPPPAPVISPP 1210
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 756 PPXLPPXPPXXPPXXXTXAPLXGS 827
PP PP PP PP PL GS
Sbjct: 424 PPYAPPPPPPPPPPPPQALPLPGS 447
>09_04_0506 - 18188785-18190599
Length = 604
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/94 (23%), Positives = 27/94 (28%)
Frame = +2
Query: 542 PXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSX 721
P PP + P P Q S PP P + P +V +
Sbjct: 66 PISQQPPPLQAPPPPPQQQQQQQQLQAPPSLPPPPPQRQP-----EKVHIPGVAAVPPAP 120
Query: 722 VXXXGVSQXXRPPPXPPXXXXPPPXXXNRXPXXG 823
V P P PP PPP N+ G
Sbjct: 121 VPDRPNPVHLPPQPQPPVAAAPPPPPHNQIQPGG 154
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/67 (25%), Positives = 20/67 (29%)
Frame = +1
Query: 634 PXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPPXSQPXP 813
P P PP P P P + P P +PP +P PP P
Sbjct: 553 PMQPPVMPPPIPKLLSPPAPQAPMP---PLKASPVPPPEPSPPPAPKAAPPPPPPKSTGP 609
Query: 814 XXXXXPP 834
PP
Sbjct: 610 GPPRPPP 616
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = +1
Query: 616 PXSALLPXXPXTCPPH--SPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXX 789
P + P P T PP+ SP P VP P PP P
Sbjct: 78 PYTPPTPRPPPT-PPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYV 136
Query: 790 PPXSQPXPXXXXXPP 834
PP + P P PP
Sbjct: 137 PPPTPPSPPPYVPPP 151
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/72 (26%), Positives = 22/72 (30%)
Frame = +1
Query: 592 PXXXXXXAPXSALLPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSP 771
P +P + P P PP+ P P P VP P PP P
Sbjct: 88 PTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPP-----YVPPPTPPSPPPYVPPPTPP 142
Query: 772 XXXXXXPPXSQP 807
PP S P
Sbjct: 143 SPPPYVPPPSPP 154
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 741 PKXXDPPXLPPXPPXXPPXXXTXAPL 818
P PP +PP PP PP AP+
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPM 289
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/97 (23%), Positives = 27/97 (27%)
Frame = +1
Query: 505 THXAXSPGPXXXSXGXXXPXXRAXXSIXXPXXXXXXAPXSALLPXXPXTCPPHSPXXXXX 684
T A +P P + P + + P P A P P PP P
Sbjct: 25 TTAAPAPSPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPP--PPPPPSVTSS 82
Query: 685 PXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPP 795
P P P P PP SP PP
Sbjct: 83 PPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/77 (24%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +1
Query: 613 APXSALLPXXPXT---CPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXX 783
+P + P P T PP +P P G + T +PP P
Sbjct: 32 SPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPP 91
Query: 784 XXPPXSQPXPXXXXXPP 834
PP + P P PP
Sbjct: 92 PPPPAASPPPPPPSPPP 108
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = +1
Query: 592 PXXXXXXAPXSALLPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSP 771
P AP LP P P SP P P P P PP P
Sbjct: 1129 PPPLPLDAPPPPPLPEGPPPLPSDSPPCQP-PLPPSPPPA-TPPPPPPLSPSLPPPPPPP 1186
Query: 772 XXXXXXPPXSQPXPXXXXXPP 834
PP P P PP
Sbjct: 1187 PLPSGPPPQPAPPPLPIQPPP 1207
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = +1
Query: 631 LPXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTX--TPPXSPXXXXXXPPXSQ 804
LP P P +P P L P P TPP P PP
Sbjct: 1125 LPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPP 1184
Query: 805 PXPXXXXXPPR 837
P P PP+
Sbjct: 1185 PPPLPSGPPPQ 1195
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/60 (26%), Positives = 20/60 (33%)
Frame = +1
Query: 655 PPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPPXSQPXPXXXXXPP 834
PP +P P P P R P + PP P PP ++P PP
Sbjct: 41 PPFAPPGGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQP-----PPPFARPAAPVQQQPP 95
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 729 RAXXPKXXDPPXLPPXPPXXPP 794
RA P+ PP PP PP PP
Sbjct: 255 RAPPPQSVRPPPPPPPPPPPPP 276
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +2
Query: 542 PXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSX 721
P G PP P P P + PP P P P P S S
Sbjct: 31 PESGPPPPPAPDMPPPPPTPAPQSSP---APPPAPDMTP--PPGPGPAAAPSPHSPSPSN 85
Query: 722 VXXXGVSQXXRPPPXPPXXXXP 787
+ PPP PP P
Sbjct: 86 APWVAPAADIPPPPPPPPNPLP 107
>05_01_0380 + 2978256-2979284
Length = 342
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 755 PPPXPPXXXXPPPXXXNRXP 814
PPP PP PPP +R P
Sbjct: 29 PPPPPPPPPPPPPRPFSRKP 48
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +3
Query: 732 AXXPKXXDPPXLPPXPPXXP---PXXXTXAPLXGSS 830
A P PP PP PP P P T AP G S
Sbjct: 84 ALPPSSPPPPSPPPPPPSSPPPVPPSPTAAPTTGQS 119
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 PXTXTPPXSPXXXXXXPPXSQPXPXXXXXPP 834
P TPP SP PP P P PP
Sbjct: 84 PAASTPPASPTANASPPPSLPPPPPPLRPPP 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,300
Number of Sequences: 37544
Number of extensions: 249127
Number of successful extensions: 3687
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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