Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_N16
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.048
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.048
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.048
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 25 1.6
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 29 3.2
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 29 3.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.048
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Frame = +2
Query: 542 PXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSX 721
P GSPP P P + PR S PP P +P P G S
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP------------PAGGSP 289
Query: 722 VXXXGVSQXXRPPP--XPPXXXXPPPXXXNRXPXXG 823
S PPP PP PPP P G
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +1
Query: 634 PXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPPXSQPXP 813
P P P P P P P P +PP P P S P P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 814 XXXXXPP 834
PP
Sbjct: 316 QAGGSPP 322
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.048
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Frame = +2
Query: 542 PXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSX 721
P GSPP P P + PR S PP P +P P G S
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP------------PAGGSP 310
Query: 722 VXXXGVSQXXRPPP--XPPXXXXPPPXXXNRXPXXG 823
S PPP PP PPP P G
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +1
Query: 634 PXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPPXSQPXP 813
P P P P P P P P +PP P P S P P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 814 XXXXXPP 834
PP
Sbjct: 337 QAGGSPP 343
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.048
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Frame = +2
Query: 542 PXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSX 721
P GSPP P P + PR S PP P +P P G S
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP------------PAGGSP 295
Query: 722 VXXXGVSQXXRPPP--XPPXXXXPPPXXXNRXPXXG 823
S PPP PP PPP P G
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/67 (25%), Positives = 18/67 (26%)
Frame = +1
Query: 634 PXXPXTCPPHSPXXXXXPXPXXXLXGXVPXXXXRXXPXTXTPPXSPXXXXXXPPXSQPXP 813
P P P P P P P P +PP P P S P P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 814 XXXXXPP 834
PP
Sbjct: 322 QAGGSPP 328
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 755 PPPXPPXXXXPPP 793
PPP PP PPP
Sbjct: 579 PPPPPPMLGGPPP 591
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 13/55 (23%), Positives = 15/55 (27%)
Frame = +2
Query: 494 AAXEHTERARPVXXXXPXGGSPPXXELXXPXPXQXXXNXXXPRAXSXPPXPXXAP 658
A H E+ R P PP + P P PP P P
Sbjct: 515 APGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLP 569
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 617 PRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSXVXXXGVSQXXRPPPXPPXXXXPPPX 796
PRA PP AP +P SV + G + PPP PP PPP
Sbjct: 276 PRANDLPPTEM-APTLPQISTSSN-GASPSVSPASTSPSGPAPSI-PPPRPPALAPPPPV 332
Query: 797 XXNRXP 814
R P
Sbjct: 333 APRRNP 338
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +2
Query: 617 PRAXSXPPXPXXAPXIPXXXXXIXCPXXXSVGXSXVXXXGVSQXXRPPPXPPXXXXPPPX 796
PRA PP AP +P SV + G + PPP PP PPP
Sbjct: 276 PRANDLPPTEM-APTLPQISTSSN-GASPSVSPASTSPSGPAPSI-PPPRPPALAPPPPV 332
Query: 797 XXNRXP 814
R P
Sbjct: 333 APRRNP 338
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 741 PKXXDPPXLPPXPPXXPPXXXTXAPLXGSS 830
P PP PP PP PP P SS
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQTPSASSS 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,512,572
Number of Sequences: 27780
Number of extensions: 148386
Number of successful extensions: 1230
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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