Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_N11
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    28   8.6  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      28   8.6  
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    28   8.6  

>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 19/60 (31%), Positives = 22/60 (36%)
 Frame = -1

Query: 591 PXGXXXPXXLPXXXNPAPPXPPAXXPPXXAPLQALIXIXCQMSVSTRXGEAGSAPRLSRV 412
           P     P  LP    P PP PPA       P  +LI    ++       EA  A  LS V
Sbjct: 485 PSPPALPPALPNPNEPPPPPPPAEALRADQPRHSLIH---EVGAQADPAEANGAQALSPV 541


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 500 GAXXGGXXAGGXGGAGXXXXGXXXGNXXPXGXACXAXPS 616
           G   GG   GG GG G    G   G+  P G A  + PS
Sbjct: 481 GGGGGGGGFGG-GGGGFGGGGGGFGSGSPFGGAAPSPPS 518


>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 597 AXPXGXXXPXXLPXXXNPAPPXPPAXXPPXXAP 499
           A P G   P  +P    P  P PP   PP  AP
Sbjct: 772 APPGGRQAP--MPPRGGPGAPPPPGMRPPPGAP 802


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 597 AXPXGXXXPXXLPXXXNPAPPXPPAXXPPXXAP 499
           A P G   P  +P    P  P PP   PP  AP
Sbjct: 772 APPGGRQAP--MPPRGGPGAPPPPGMRPPPGAP 802


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -1

Query: 591 PXGXXXPXXLPXXXNPAPPXPPAXXPP 511
           P G   P   P    P PP PP   PP
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRPP 269


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 597 AXPXGXXXPXXLPXXXNPAPPXPPAXXPPXXAP 499
           A P G   P  +P    P  P PP   PP  AP
Sbjct: 772 APPGGRQAP--MPPRGGPGAPPPPGMRPPPGAP 802


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 597 AXPXGXXXPXXLPXXXNPAPPXPPAXXPPXXAP 499
           A P G   P  +P    P  P PP   PP  AP
Sbjct: 772 APPGGRQAP--MPPRGGPGAPPPPGMRPPPGAP 802


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,947,508
Number of Sequences: 27780
Number of extensions: 146688
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)