Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_N02
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   9.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 305 PAIRAEGV*CKGYWIFFFXMI 367
           PAIR+ G+ C  Y +FFF MI
Sbjct: 389 PAIRSIGLKCLEY-LFFFKMI 408


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 305 PAIRAEGV*CKGYWIFFFXMI 367
           PAIR+ G+ C  Y +FFF MI
Sbjct: 389 PAIRSIGLKCLEY-LFFFKMI 408


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 475 PKXT*QLKSXCFANDSYYRNRN 540
           PK    L + C  +++YY N N
Sbjct: 301 PKIISSLSNSCNYSNNYYNNNN 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,227
Number of Sequences: 438
Number of extensions: 2160
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)