Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_N01
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0302 - 2286171-2286341,2286747-2286968                           29   3.8  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   3.8  
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331...    29   3.8  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   8.8  
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734...    28   8.8  

>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 81  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 182
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 73  FYVDSKGAGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 219
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>08_02_1418 -
           26931896-26932339,26932435-26932668,26932805-26933110,
           26933462-26933644,26934386-26934493
          Length = 424

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 529 PSSLGMGKGVSPPYFQVNDESQASR 455
           PSSLGMG+ +SPP   V+ E    R
Sbjct: 329 PSSLGMGRALSPPKMSVDLEMGMKR 353


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 441 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 352
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


>01_01_0930 +
           7347680-7347886,7348030-7348082,7348175-7348247,
           7348493-7348594,7348697-7348798,7348888-7348959,
           7349067-7349129,7349210-7349251,7349620-7349679,
           7349755-7349865,7350044-7350214,7350392-7350482,
           7350571-7350845
          Length = 473

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 33/126 (26%), Positives = 55/126 (43%)
 Frame = -2

Query: 408 HPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFD 229
           +P++EDV M  + A+ DY VK    + V   ++ ++VS +    +   DP+       FD
Sbjct: 71  NPIVEDVRMRGDAAVKDYTVKF---DKVALDDVVVRVSDLPDVEL---DPAV---KEAFD 121

Query: 228 TVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSGSFGVYVKS*SLILHS 49
            V YDNI       K    +      +    I R +        GS G+YV   + +L S
Sbjct: 122 -VAYDNIYAFHVSQKLPEKTVENMKGVRCKRITRCI--------GSVGLYVPGGTAVLPS 172

Query: 48  FGLLVS 31
             L+++
Sbjct: 173 TALMLA 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,680,218
Number of Sequences: 37544
Number of extensions: 321844
Number of successful extensions: 758
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)