Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M24
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0591 + 4400011-4400106,4400508-4400648,4400987-4401202           29   4.0  
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785...    29   4.0  
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732...    29   5.3  

>07_01_0591 + 4400011-4400106,4400508-4400648,4400987-4401202
          Length = 150

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 144 FSLFVSLYFPFFYCF*DL 197
           FSLF+ L+FPFF C  D+
Sbjct: 11  FSLFLPLFFPFFQCAYDM 28


>04_04_1250 +
           32077590-32078000,32078132-32078308,32078437-32078561,
           32078629-32078761,32078866-32079015,32079105-32079158,
           32079437-32079532,32080021-32080095,32080723-32080824,
           32080903-32081589,32081686-32081817,32081916-32082023,
           32082170-32082319
          Length = 799

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -2

Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANV--TKALQEQVK-EFERAMKEAQRRDQGIVND 235
           D   A  +ED ++  +I+  K     AN   T A +++ K + +R ++  +R+ +    D
Sbjct: 257 DDSDASSSEDEAQNPQIILSKEDVYKANHKGTAATKKKKKAKLQRVIRSMKRQQRKSTED 316

Query: 234 EGSNEIEELTDVKD 193
            GSN    LT +KD
Sbjct: 317 TGSNYYSPLTYLKD 330


>07_03_1578 +
           27872636-27872840,27872928-27873175,27873215-27873295,
           27873665-27873822,27874391-27874450,27874655-27874873,
           27875100-27875201,27875352-27875500,27875582-27875734,
           27875839-27876194
          Length = 576

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 144 FSLFVSLYFPFFYCF*DL*RQSAPQFHWILHH 239
           FS+ VSL+FP FY   +   +S P   W   H
Sbjct: 226 FSMRVSLFFPLFYAMINSGGESLPPREWYSWH 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,971,029
Number of Sequences: 37544
Number of extensions: 121508
Number of successful extensions: 379
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)