Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M24
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69793-3|CAA93672.2|  709|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    29   3.6  
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    29   4.7  
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     29   4.7  
M37234-1|AAA28120.1|  272|Caenorhabditis elegans myosin I protein.     29   4.7  
AL021572-1|CAA16516.2|  654|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z69793-3|CAA93672.2|  709|Caenorhabditis elegans Hypothetical
           protein R03A10.3 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -2

Query: 408 TDVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVN-DE 232
           T + A    +DS+  ++  S  G  + +    ++   ++EFERA +E      GI    +
Sbjct: 214 TGIGALLVRKDSAHLIEKTSFAGGTVQSVDEMSMFFVLREFERAFEEGTLNYYGIAQLQK 273

Query: 231 GSNEIEELTDVKDLRS 184
           G  EIE    +  +R+
Sbjct: 274 GFEEIERCGGISSIRN 289


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402  VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
            VE      +SS+K+     K  ++  + TKA +E ++  E+A+  ++A RR+Q  +ND  
Sbjct: 3225 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 3281

Query: 228  SNEIEELTDVKDLR 187
            +N  +ELT V + +
Sbjct: 3282 NNLEKELTKVDEFK 3295



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402  VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
            VE      +SS+K+     K  ++  + TKA +E ++  E+A+  ++A RR+Q  +ND  
Sbjct: 4128 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 4184

Query: 228  SNEIEELTDVKDLR 187
            +N  +ELT V + +
Sbjct: 4185 NNLEKELTKVDEFK 4198



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402  VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
            VE      +SS+K+     K  ++  + TKA +E ++  E+A+  ++A RR+Q  +ND  
Sbjct: 5082 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 5138

Query: 228  SNEIEELTDVKDLR 187
            +N  +ELT V + +
Sbjct: 5139 NNLEKELTKVDEFK 5152



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402  VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
            VE      +SS+K+     K  ++  + TKA +E ++  E+A+  ++A RR+Q  +ND  
Sbjct: 5985 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 6041

Query: 228  SNEIEELTDVKDLR 187
            +N  +ELT V + +
Sbjct: 6042 NNLEKELTKVDEFK 6055



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402  VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
            VE      +SS+K+     K  ++  + TKA +E ++  E+A+  ++A RR+Q  +ND  
Sbjct: 6888 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 6944

Query: 228  SNEIEELTDVKDLR 187
            +N  +ELT V + +
Sbjct: 6945 NNLEKELTKVDEFK 6958


>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
            protein R06C7.10 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 405  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 244
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
            R06C7.10 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 405  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 244
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 405  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 244
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>M37234-1|AAA28120.1|  272|Caenorhabditis elegans myosin I protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 244
           + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 62  EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 113


>AL021572-1|CAA16516.2|  654|Caenorhabditis elegans Hypothetical
           protein W06H3.1 protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/64 (21%), Positives = 31/64 (48%)
 Frame = -2

Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSN 223
           +E  R   ++ +   I       LDA + +A  E  K+++  +KE  R  + + + E + 
Sbjct: 356 LEKLRLETNAKQAAVIPEFDKKKLDAELARATAEIQKKYDEKLKEVVRTQKQLYDIEHAK 415

Query: 222 EIEE 211
           +++E
Sbjct: 416 DVDE 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,823,542
Number of Sequences: 27780
Number of extensions: 113803
Number of successful extensions: 451
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)