Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M20
         (720 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    36   0.043
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   2.8  
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98...    29   4.9  
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060...    28   6.5  
01_06_0695 - 31292622-31293317                                         28   8.6  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 35.5 bits (78), Expect = 0.043
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +2

Query: 86  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRESK 229
           PS TP  ER  S+D   PR     Y   R+RD    K+  S D   SK
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRDYSHSK 412


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 429  PPPPPXXXKXPPGEXXXTPLXXXPP 355
            PPPPP     PP +    PL   PP
Sbjct: 1182 PPPPPPLPSGPPPQPAPPPLPIQPP 1206


>05_01_0148 -
           985745-986180,986290-986385,986498-986694,986824-986919,
           987020-987059,987751-987857
          Length = 323

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 89  STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRESKWASXSRFP 253
           S +PR+ R  S  YS  R R+  Y   RSR      +    +L  S+  S SR P
Sbjct: 155 SPSPRRGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARR-ELERSRSLSYSRSP 208


>08_02_0104 +
           12404890-12405129,12405244-12405333,12405953-12406036,
           12406888-12407132,12409032-12409095,12409270-12409968,
           12410063-12410176,12410287-12410418,12410594-12410770,
           12411085-12411138,12411230-12411292,12411396-12412307,
           12412408-12412535,12413680-12413962
          Length = 1094

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = +2

Query: 62  RSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRE----SK 229
           R  HD +L         KSST  +  R   E      SR     +KT+S++  E    +K
Sbjct: 741 RDVHDISLNLKLSLDSEKSSTKENSVRRNLEDAVQKLSRGVSANRKTESVENMEATTGNK 800

Query: 230 WASXSR 247
           W S  R
Sbjct: 801 WPSLRR 806


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 68  QHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 172
           Q D   PS++      SST  S P HR  L P  R
Sbjct: 13  QQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,582,823
Number of Sequences: 37544
Number of extensions: 290875
Number of successful extensions: 1318
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)