Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M20
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    37   0.063

>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 37.1 bits (82), Expect = 0.063
 Identities = 28/83 (33%), Positives = 38/83 (45%)
 Frame = +2

Query: 26  RTNHLAQGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTD 205
           R  H + G S  R +HD+  PS  PR+ R  S+D S PR      PD  SR  R    +D
Sbjct: 205 RPQHNSSGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPD-TSR--RTLGSSD 260

Query: 206 SIDLRESKWASXSRFPXLNCKTP 274
           +  LR ++  S    P +    P
Sbjct: 261 TQQLRRARHDSPDLAPNVTYSLP 283


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,032,694
Number of Sequences: 237096
Number of extensions: 1409989
Number of successful extensions: 5610
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5188
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)