Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M16
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0454 - 3484319-3486265                                           31   1.4  
11_06_0679 - 26227654-26227770,26234067-26236217                       30   2.4  
04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042     30   2.4  
11_01_0385 + 2915532-2916482                                           28   7.4  
11_01_0433 - 3323372-3324616,3324708-3324905                           28   9.7  
02_04_0541 - 23757643-23757912                                         28   9.7  

>03_01_0454 - 3484319-3486265
          Length = 648

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 29/93 (31%), Positives = 41/93 (44%)
 Frame = +3

Query: 438 AASGGLVAGGKAAAESRSRSTTVEHGAGRQRVCRGRVSGKDIWNIAXRSFHLATVLALDR 617
           AA GG  +GGK A    + + T    AGR   C+  +        A R   ++++L    
Sbjct: 25  AALGG--SGGKPATADLAAAATAAAAAGRASECQSLLLRMSRRRGACRREIVSSLLGSSP 82

Query: 618 TGQSPSIPRLLXRKYCISFXQPRNPFSSLLCIL 716
           T Q P +  LL R Y  S  +PR  F +   IL
Sbjct: 83  TPQ-PRVFDLLIRTYTQS-RKPREAFEAFRLIL 113


>11_06_0679 - 26227654-26227770,26234067-26236217
          Length = 755

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/64 (29%), Positives = 23/64 (35%)
 Frame = +2

Query: 437 RG*WWSSGRRQGSRGEQEQEHHGXTXXXXXXXXXXXXXXKRHLEHCXAKLPPRHGPGSGP 616
           RG WW+SGR +G     E+                        E C +K    HGPG   
Sbjct: 582 RGQWWNSGRGRGRWWNNERGKGRENKPDQTKFCQTHGPGGHSTEECYSKFCHIHGPGG-- 639

Query: 617 HWTE 628
           H TE
Sbjct: 640 HSTE 643


>04_03_0757 + 19316949-19317892,19318403-19318430,19318932-19319042
          Length = 360

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 429 AETAASGGLVAGGKAAAESRSRSTTVEHGAGRQ 527
           AE +  G    GG AAA + +R+T  +HGA  Q
Sbjct: 325 AEGSEGGVAEGGGGAAAAAHARATATDHGAAPQ 357


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 590 PRHGPGSGPHWTEPVNSQAP 649
           P HG G  P W  P N+Q P
Sbjct: 161 PHHGGGENPAWPRPGNNQWP 180


>11_01_0433 - 3323372-3324616,3324708-3324905
          Length = 480

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 390 RLDTDICHN-IEMNAETAASGGLVAGGKAAAESRSR 494
           +++T +  N +EM  E AA+ G   GG AAA  R R
Sbjct: 5   KVETIVAGNYVEMEREGAATAGEGVGGAAAASGRRR 40


>02_04_0541 - 23757643-23757912
          Length = 89

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 562 SGTLPREASTSPRSWLWTALDRARQFPGS 648
           +G L R  + +  SWLWT    AR+ P S
Sbjct: 8   AGDLSRSVAYAAASWLWTNAGAARRPPSS 36


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,006,376
Number of Sequences: 37544
Number of extensions: 270554
Number of successful extensions: 1014
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)