Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M15
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   1.8  
12_01_0302 - 2286171-2286341,2286747-2286968                           29   4.2  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   4.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.2  
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848...    28   7.4  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = -3

Query: 737  GGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRGG 606
            GG   PPP     G    PP               GG PPP GG
Sbjct: 1180 GGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = -3

Query: 737  GGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
            GG   PPP    GG   PPP               G  PPP
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPP 1186


>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 81  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 182
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/57 (28%), Positives = 17/57 (29%)
 Frame = -3

Query: 722 PPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRGGXXXXXXFFXKXXXXPPPP 552
           P P    GG  P PP               G  PPP+G               PPPP
Sbjct: 9   PHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPP 65


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -3

Query: 722 PPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
           PPP     G  PPPP K            K G PPP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379


>02_04_0179 +
           20682852-20684510,20684593-20684661,20684741-20684809,
           20686779-20688206
          Length = 1074

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -3

Query: 722 PPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRGG 606
           PPP    G   PPPP              +G  PPP  G
Sbjct: 24  PPPPLLTGTAVPPPPPAAAQPQPQQATVAEGDPPPPATG 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,892,930
Number of Sequences: 37544
Number of extensions: 349166
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)