Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_M15
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.23
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.2
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 30 2.2
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 29 5.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRG 609
P G G PPP G PPPP + GG PPP G
Sbjct: 276 PTGSPPPPPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRG 609
P G G PPP G PPPP + GG PPP G
Sbjct: 297 PTGSPPPPPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRG 609
P G G PPP G PPPP + GG PPP G
Sbjct: 282 PTGSPPPPPAGGSPPPPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 734 GXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRG 609
G PPP GG PPPP PPP G
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPPRGG 606
P G G PPP G PPPP PPP G
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 69 KILRRLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQFW 188
++L L +K GE +P GRS K+E M + FW
Sbjct: 761 QLLNTLNEMKKALGEGVPKSGRSLNSTCKIETMTNKTPFW 800
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-like
cell adhesionmolecule family protein 1 protein.
Length = 1073
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 204 KRGTNPKTALLSASIQASLPSSEIYR--QLVDPRHVS 100
K +NPKT+ LS I SLP E+ R +P+H +
Sbjct: 965 KTRSNPKTSKLSPIILTSLPGDELKRPADYEEPKHAT 1001
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
P G GG PPP GG PPPP KGG PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP--GGCPPPPP-------PPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
P G GG PPP GG PPPP KGG PPP
Sbjct: 747 PPGGLPPISGGPPPPPPPP--GGCPPPPP-------PPPPGGFKGGPPPP 787
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXP----PPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
P G GG P PP GG PPPP G PPP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 764 PXGXKKKXXGGXXXPPPXXXXGGXXPPPPXKXXXXXXXXXXXXKGGXPPP 615
P G GG PPP GG PPPP KGG PPP
Sbjct: 330 PPGGLPPISGGPPPPPPPP--GGCPPPPP-------PPPPGGFKGGPPPP 370
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -1
Query: 721 PPXXXXXGXXXPPPPXXXGXXXXXXXXXKRGXXPPXGGG 605
PP G PPPP RG PP GG
Sbjct: 1457 PPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGG 1495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,700,303
Number of Sequences: 27780
Number of extensions: 209817
Number of successful extensions: 504
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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