Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_M03
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   180   1e-45

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  180 bits (438), Expect = 1e-45
 Identities = 94/210 (44%), Positives = 121/210 (57%)
 Frame = -2

Query: 754 KSXSSXSGAMPHCQLSFPPTTPAWVQRKXXFSRLFXSLPRFQRGTIEIINDVHILKPGDK 575
           K   + +GA+  C +  PP        K  F +      +  RGTIEI+NDVH++K GDK
Sbjct: 107 KGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDK 166

Query: 574 VGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 395
           VGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+  E+LR +F +GV NVA++S
Sbjct: 167 VGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVS 226

Query: 394 LAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXX 215
           LA+ YPT+AS  HS+ANG +N+L               IK FI DPSKF           
Sbjct: 227 LAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAA 282

Query: 214 XXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                              SDDDMGFGLFD
Sbjct: 283 AAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,075
Number of Sequences: 27780
Number of extensions: 282038
Number of successful extensions: 677
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)