Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_M02
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.0
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 4.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.1
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 9.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 9.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.1
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 24 9.7
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 730 PXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P + P S PPPP PP P P
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXP 807
P + P PP P P PPPP PP P
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 715 PXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P PP G + PPPP PP P P
Sbjct: 114 PVQPPPPVQYQNQGPQYIEAPPPPPSPPPPPPP 146
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 676 PVXXCXXPXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXP-PXXP 807
P+ C P PP P +P PPPP P P P
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 760 SLPXSXPPPPXPP 798
S+P PPPP PP
Sbjct: 571 SVPGGPPPPPPPP 583
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 778 PPPPXPPXXP 807
PPPP PP P
Sbjct: 576 PPPPPPPPPP 585
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/99 (25%), Positives = 27/99 (27%)
Frame = +1
Query: 517 PSXXPXXXXAPXXNPPGXGNLXPXXXSNXPXLXAXGMXXXXPXRXGXXXXXXXPVXXCXX 696
PS P P PP G + P + G PV
Sbjct: 162 PSVEPSEDPQPS-GPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSED 220
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P S P GP S S P P PP PP P
Sbjct: 221 PKPSEPPSPGPVDP-SDEPSPSDPPGPPGPPGPPTRRPP 258
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Frame = +1
Query: 715 PXXGPPXAXSPXXGXSLPX----SXPPPPXPPXXPXP 813
P PP A P P PPPP PP P P
Sbjct: 108 PAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP 144
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 676 PVXXCXXPXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P+ P P G P P G PPPP PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P PP P G P PP PP P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P G P P G PPPP PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPP---PXPPXXPXP 813
P + P PP P P PPP P PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 676 PVXXCXXPXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P+ P P G P P G PPPP PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P PP P G P PP PP P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P G P P G PPPP PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPP---PXPPXXPXP 813
P + P PP P P PPP P PP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 676 PVXXCXXPXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P+ P P G P P G PPPP PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P PP P G P PP PP P P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPPPXPPXXPXP 813
P P G P P G PPPP PP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +1
Query: 697 PXXSXXPXXGPPXAXSPXXGXSLPXSXPPP---PXPPXXPXP 813
P + P PP P P PPP P PP P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 754 GXSLPXSXPPPPXPPXXP 807
G S P + PPPP PP P
Sbjct: 294 GYSAPAAAPPPPPPPPPP 311
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 754 GXSLPXSXPPPPXPPXXP 807
G S P + PPPP PP P
Sbjct: 294 GYSAPAAAPPPPPPPPPP 311
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/104 (25%), Positives = 32/104 (30%), Gaps = 5/104 (4%)
Frame = +1
Query: 517 PSXXPXXXXAPXXNPP--GXGNLXPXXXSNXPXLXAXGMXXXXPXRXGXXXXXXXPVXXC 690
P+ P P +PP G G+ P + P G P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT----GSPPPPPAGGS 288
Query: 691 XXPXXSXXPXXGPPXAXSPXXGXSLP---XSXPPPPXPPXXPXP 813
P + P PP SP G SLP PPP P P
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/104 (25%), Positives = 32/104 (30%), Gaps = 5/104 (4%)
Frame = +1
Query: 517 PSXXPXXXXAPXXNPP--GXGNLXPXXXSNXPXLXAXGMXXXXPXRXGXXXXXXXPVXXC 690
P+ P P +PP G G+ P + P G P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT----GSPPPPPAGGS 309
Query: 691 XXPXXSXXPXXGPPXAXSPXXGXSLP---XSXPPPPXPPXXPXP 813
P + P PP SP G SLP PPP P P
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/104 (25%), Positives = 32/104 (30%), Gaps = 5/104 (4%)
Frame = +1
Query: 517 PSXXPXXXXAPXXNPP--GXGNLXPXXXSNXPXLXAXGMXXXXPXRXGXXXXXXXPVXXC 690
P+ P P +PP G G+ P + P G P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT----GSPPPPPAGGS 294
Query: 691 XXPXXSXXPXXGPPXAXSPXXGXSLP---XSXPPPPXPPXXPXP 813
P + P PP SP G SLP PPP P P
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPP 337
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 528 PXXXPRAXXXPPRXGXPXPXXPXXSPRPPRXRXAXLL-PXPXXXLXXXPXAXXXVXLPPA 704
P P PP P P P +PRPP + + P P P +PP
Sbjct: 264 PPPPPSVTPMPP----PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 705 FXXXXXGPP 731
GPP
Sbjct: 320 PPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 528 PXXXPRAXXXPPRXGXPXPXXPXXSPRPPRXRXAXLL-PXPXXXLXXXPXAXXXVXLPPA 704
P P PP P P P +PRPP + + P P P +PP
Sbjct: 274 PPPPPSVTPMPP----PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 705 FXXXXXGPP 731
GPP
Sbjct: 330 PPPSRFGPP 338
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 806 GXXGGXGGGGXEXGRDXPXXGEXAXGGPXXGXXEXXGXXHXXTG 675
G G GGGG G G A GGP G G + G
Sbjct: 179 GGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGG 222
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 806 GXXGGXGGGGXEXGRDXPXXGEXAXGGPXXGXXEXXGXXHXXTG 675
G G GGGG G G A GGP G G + G
Sbjct: 217 GGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGG 260
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 706 SXXPXXGPPXAXSPXXGXSLPXSXPPPPXPP 798
S P PP P L PPPP PP
Sbjct: 1333 SSSPSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 766 PXSXPPPPXPP 798
P S PPPP PP
Sbjct: 750 PSSTPPPPPPP 760
Score = 21.8 bits (44), Expect(2) = 9.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 778 PPPPXPPXXPXP 813
PPPP PP P
Sbjct: 756 PPPPPPPLAAAP 767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,023,344
Number of Sequences: 27780
Number of extensions: 133032
Number of successful extensions: 1459
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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