Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_L20
         (1102 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991...    25   5.7  
07_01_0080 + 587674-588510                                             25   6.1  

>09_06_0123 -
           20997498-20997512,20998015-20998100,20999066-20999198,
           20999264-20999341,21000130-21000216,21001164-21001254,
           21001338-21001488,21001567-21002296,21002404-21002820
          Length = 595

 Score = 24.6 bits (51), Expect(2) = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 461 GXFXXPPPPPP 429
           G F  PPPPPP
Sbjct: 352 GPFPRPPPPPP 362



 Score = 23.0 bits (47), Expect(2) = 5.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 446 PPPPPPXFFKXXXKF 402
           PPPPPP  F     F
Sbjct: 358 PPPPPPGHFMVPQPF 372


>07_01_0080 + 587674-588510
          Length = 278

 Score = 24.6 bits (51), Expect(2) = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 461 GXFXXPPPPPP 429
           G F  PPPPPP
Sbjct: 86  GMFRRPPPPPP 96



 Score = 23.0 bits (47), Expect(2) = 6.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 446 PPPPPPXFF 420
           PPPPPP  F
Sbjct: 115 PPPPPPPLF 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,931,269
Number of Sequences: 37544
Number of extensions: 171670
Number of successful extensions: 3041
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2928
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3304646468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)