BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_L16
(1221 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.84
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 1.9
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 2.6
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 7.8
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 7.8
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 7.8
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 27.5 bits (58), Expect = 0.84
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 820 GGXXXPPPPPPP 855
GG PPPPPPP
Sbjct: 525 GGPLGPPPPPPP 536
Score = 26.2 bits (55), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Frame = -1
Query: 615 PPPPPPXXXXXKKXPPP--PPP 556
PPPPPP PP PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 558 GGGGGXFFXXXXXGGGGGG 614
GGGGG GGGGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGG 231
Score = 26.2 bits (55), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 559 GGGGGXFFXXXXXGGGGGG 615
GGGGG GGGGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGG 231
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.8 bits (54), Expect = 2.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 817 GGGXXXPPPPPPP 855
G G PPPPPPP
Sbjct: 779 GIGSPPPPPPPPP 791
Score = 21.0 bits (42), Expect(2) = 7.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 615 PPPPPP 598
PPPPPP
Sbjct: 783 PPPPPP 788
Score = 21.0 bits (42), Expect(2) = 7.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 573 PPPPPP 556
PPPPPP
Sbjct: 784 PPPPPP 789
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.2 bits (50), Expect = 7.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 557 GGGGGGXFFXXXXXGGGGGG 616
GGGGGG GGGGGG
Sbjct: 296 GGGGGGG-----GGGGGGGG 310
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.2 bits (50), Expect = 7.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 557 GGGGGGXFFXXXXXGGGGGG 616
GGGGGG GGGGGG
Sbjct: 296 GGGGGGG-----GGGGGGGG 310
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 24.2 bits (50), Expect = 7.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 557 GGGGGGXFFXXXXXGGGGGG 616
GGGGGG GGGGGG
Sbjct: 248 GGGGGGG-----GGGGGGGG 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,510
Number of Sequences: 2352
Number of extensions: 8203
Number of successful extensions: 224
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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