Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_L14
         (1054 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724           29   4.7  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.7  

>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
          Length = 574

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 7   PFFGYXXKKSLGGYRRXKAPLGGPPSERGNSSLKKPGPXXPLXS 138
           P +    K   GG         G PS RGN+ +K P P  P  S
Sbjct: 441 PSYNTGYKPQGGGGFPEPYGYSGSPSHRGNAGMKSPSPFHPTGS 484


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 573 PPPPXXXKKKXPPPPXXK 520
           PPPP   KK  PPPP  K
Sbjct: 366 PPPPPGGKKGGPPPPPPK 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.149    0.490 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,327,301
Number of Sequences: 37544
Number of extensions: 295365
Number of successful extensions: 1471
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3117811332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)