Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_L10
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 274 2e-73
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 274 2e-73
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 274 2e-73
BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein. 274 2e-73
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 274 2e-73
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 191 2e-48
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 130 7e-30
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 130 7e-30
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 130 7e-30
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 130 7e-30
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 70 1e-11
L27841-1|AAA60120.1| 2024|Homo sapiens pericentriol material 1 p... 30 8.1
BC133052-1|AAI33053.1| 1859|Homo sapiens PCM1 protein protein. 30 8.1
AK091406-1|BAC03656.1| 706|Homo sapiens protein ( Homo sapiens ... 30 8.1
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 274 bits (673), Expect = 2e-73
Identities = 126/188 (67%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Frame = -1
Query: 576 LMNXLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDL 409
+M LWG+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L
Sbjct: 256 MMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKL 315
Query: 408 LKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEG 229
++K+ + + ED DK+G+ LL+ VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEG
Sbjct: 316 IEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEG 375
Query: 228 PHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFT 49
P DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFYAFGRVFSG V TG K RIMGPN+T
Sbjct: 376 PPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYT 435
Query: 48 PGKKEDLY 25
PGKKEDLY
Sbjct: 436 PGKKEDLY 443
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 775 QTFQRIVENVNVIIATYND-DGGPMGEVXXDPSKGSVGFGXGLHGWAFTLQ 626
QTFQRIVENVNVII+TY + + GPMG + DP G+VGFG GLHGWAFTL+
Sbjct: 176 QTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLK 226
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 274 bits (673), Expect = 2e-73
Identities = 126/188 (67%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Frame = -1
Query: 576 LMNXLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDL 409
+M LWG+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L
Sbjct: 256 MMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKL 315
Query: 408 LKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEG 229
++K+ + + ED DK+G+ LL+ VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEG
Sbjct: 316 IEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEG 375
Query: 228 PHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFT 49
P DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFYAFGRVFSG V TG K RIMGPN+T
Sbjct: 376 PPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYT 435
Query: 48 PGKKEDLY 25
PGKKEDLY
Sbjct: 436 PGKKEDLY 443
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 775 QTFQRIVENVNVIIATYND-DGGPMGEVXXDPSKGSVGFGXGLHGWAFTLQ 626
QTFQRIVENVNVII+TY + + GPMG + DP G+VGFG GLHGWAFTL+
Sbjct: 176 QTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLK 226
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 274 bits (673), Expect = 2e-73
Identities = 126/188 (67%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Frame = -1
Query: 576 LMNXLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDL 409
+M LWG+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L
Sbjct: 256 MMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKL 315
Query: 408 LKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEG 229
++K+ + + ED DK+G+ LL+ VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEG
Sbjct: 316 IEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEG 375
Query: 228 PHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFT 49
P DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFYAFGRVFSG V TG K RIMGPN+T
Sbjct: 376 PPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYT 435
Query: 48 PGKKEDLY 25
PGKKEDLY
Sbjct: 436 PGKKEDLY 443
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 775 QTFQRIVENVNVIIATYND-DGGPMGEVXXDPSKGSVGFGXGLHGWAFTLQ 626
QTFQRIVENVNVII+TY + + GPMG + DP G+VGFG GLHGWAFTL+
Sbjct: 176 QTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLK 226
>BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein.
Length = 583
Score = 274 bits (673), Expect = 2e-73
Identities = 126/188 (67%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Frame = -1
Query: 576 LMNXLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDL 409
+M LWG+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L
Sbjct: 256 MMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKL 315
Query: 408 LKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEG 229
++K+ + + ED DK+G+ LL+ VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEG
Sbjct: 316 IEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEG 375
Query: 228 PHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFT 49
P DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFYAFGRVFSG V TG K RIMGPN+T
Sbjct: 376 PPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYT 435
Query: 48 PGKKEDLY 25
PGKKEDLY
Sbjct: 436 PGKKEDLY 443
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 775 QTFQRIVENVNVIIATYND-DGGPMGEVXXDPSKGSVGFGXGLHGWAFTLQ 626
QTFQRIVENVNVII+TY + + GPMG + DP G+VGFG GLHGWAFTL+
Sbjct: 176 QTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLK 226
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 274 bits (673), Expect = 2e-73
Identities = 126/188 (67%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Frame = -1
Query: 576 LMNXLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDL 409
+M LWG+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L
Sbjct: 256 MMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKL 315
Query: 408 LKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEG 229
++K+ + + ED DK+G+ LL+ VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEG
Sbjct: 316 IEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEG 375
Query: 228 PHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFT 49
P DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFYAFGRVFSG V TG K RIMGPN+T
Sbjct: 376 PPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYT 435
Query: 48 PGKKEDLY 25
PGKKEDLY
Sbjct: 436 PGKKEDLY 443
Score = 80.6 bits (190), Expect = 6e-15
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 775 QTFQRIVENVNVIIATYND-DGGPMGEVXXDPSKGSVGFGXGLHGWAFTLQ 626
QTFQRIVENVNVII+TY + + GPMG + DP G+VGFG GLHGWAFTL+
Sbjct: 176 QTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLK 226
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 191 bits (466), Expect = 2e-48
Identities = 86/101 (85%), Positives = 92/101 (91%)
Frame = -1
Query: 327 WLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMV 148
WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMV
Sbjct: 2 WLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMV 61
Query: 147 PTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLY 25
PTSDKGRFYAFGRVFSG V TG K RIMGPN+TPGKKEDLY
Sbjct: 62 PTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 102
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 130 bits (313), Expect = 7e-30
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Frame = -1
Query: 615 EMYADKF-KIDLVKLMNXLWGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAI 442
++YAD F I+ + LWG+ +FNP+T+K++K+ ++RSF ++L+P+YK+ +
Sbjct: 330 KIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQV 389
Query: 441 MKFKKEEIDDLLKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVA 262
+ + L ++G+ + E+ + LL +V + + + M H+PSP V
Sbjct: 390 VGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVG 449
Query: 261 QKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTG 82
K ++E Y G D + + CDP+ PLM + +KM T D +F+AFGRV SG + G
Sbjct: 450 AKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAG 509
Query: 81 QKARIMGPNFTPGKKED 31
Q +++G N+T +ED
Sbjct: 510 QPVKVLGENYTLEDEED 526
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 130 bits (313), Expect = 7e-30
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Frame = -1
Query: 615 EMYADKF-KIDLVKLMNXLWGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAI 442
++YAD F I+ + LWG+ +FNP+T+K++K+ ++RSF ++L+P+YK+ +
Sbjct: 325 KIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQV 384
Query: 441 MKFKKEEIDDLLKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVA 262
+ + L ++G+ + E+ + LL +V + + + M H+PSP V
Sbjct: 385 VGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVG 444
Query: 261 QKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTG 82
K ++E Y G D + + CDP+ PLM + +KM T D +F+AFGRV SG + G
Sbjct: 445 AKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAG 504
Query: 81 QKARIMGPNFTPGKKED 31
Q +++G N+T +ED
Sbjct: 505 QPVKVLGENYTLEDEED 521
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 130 bits (313), Expect = 7e-30
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Frame = -1
Query: 615 EMYADKF-KIDLVKLMNXLWGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAI 442
++YAD F I+ + LWG+ +FNP+T+K++K+ ++RSF ++L+P+YK+ +
Sbjct: 325 KIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQV 384
Query: 441 MKFKKEEIDDLLKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVA 262
+ + L ++G+ + E+ + LL +V + + + M H+PSP V
Sbjct: 385 VGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVG 444
Query: 261 QKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTG 82
K ++E Y G D + + CDP+ PLM + +KM T D +F+AFGRV SG + G
Sbjct: 445 AKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAG 504
Query: 81 QKARIMGPNFTPGKKED 31
Q +++G N+T +ED
Sbjct: 505 QPVKVLGENYTLEDEED 521
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 130 bits (313), Expect = 7e-30
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Frame = -1
Query: 615 EMYADKF-KIDLVKLMNXLWGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAI 442
++YAD F I+ + LWG+ +FNP+T+K++K+ ++RSF ++L+P+YK+ +
Sbjct: 203 KIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQV 262
Query: 441 MKFKKEEIDDLLKKIGVTIKHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVA 262
+ + L ++G+ + E+ + LL +V + + + M H+PSP V
Sbjct: 263 VGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVG 322
Query: 261 QKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTG 82
K ++E Y G D + + CDP+ PLM + +KM T D +F+AFGRV SG + G
Sbjct: 323 AKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAG 382
Query: 81 QKARIMGPNFTPGKKED 31
Q +++G N+T +ED
Sbjct: 383 QPVKVLGENYTLEDEED 399
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 69.7 bits (163), Expect = 1e-11
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = -1
Query: 573 MNXLWGENFFNPQTKKWSKQKDDDNKRS-FCMYVLDPIYKVFDAIMKFKKEEIDDLLKKI 397
M LWG+ + N + KK K K+ F +L+ I+ ++DA++K K++ID ++ +
Sbjct: 1 MKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIVTSL 60
Query: 396 GVTI-KHEDSDKDGEALLEVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEML------ 238
G+ I E D + + + WLP A+L M+ LPSP+ R+E L
Sbjct: 61 GLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLMCTGSQ 120
Query: 237 -YEG--PHDDEAAIGIKSCDPE--APLMMYVSKMVPTSDK 133
++ P C E AP++++VSKM K
Sbjct: 121 TFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAK 160
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 126 FYAFGRVFSGKVVTGQKARIMGPNFTP 46
F AF RVFSG G+K ++GP ++P
Sbjct: 242 FIAFARVFSGVARRGKKIFVLGPKYSP 268
>L27841-1|AAA60120.1| 2024|Homo sapiens pericentriol material 1
protein.
Length = 2024
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 343 LQQSFAIFVGILMLDCDSDLLKEIINLLF 429
LQ S A F G + DC DLL EI +LF
Sbjct: 1653 LQDSLAKFAGRKLKDCGEDLLVEISEVLF 1681
>BC133052-1|AAI33053.1| 1859|Homo sapiens PCM1 protein protein.
Length = 1859
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 343 LQQSFAIFVGILMLDCDSDLLKEIINLLF 429
LQ S A F G + DC DLL EI +LF
Sbjct: 1598 LQDSLAKFAGRKLKDCGEDLLVEISEVLF 1626
>AK091406-1|BAC03656.1| 706|Homo sapiens protein ( Homo sapiens
cDNA FLJ34087 fis, clone FCBBF3005330, highly similar to
Human autoantigen pericentriol material 1 (PCM-1) mRNA.
).
Length = 706
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 343 LQQSFAIFVGILMLDCDSDLLKEIINLLF 429
LQ S A F G + DC DLL EI +LF
Sbjct: 335 LQDSLAKFAGRKLKDCGEDLLVEISEVLF 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,831,954
Number of Sequences: 237096
Number of extensions: 2618392
Number of successful extensions: 6391
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6377
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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