Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_L05
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325     29   5.4  
11_06_0607 + 25437897-25438046,25438180-25438236,25438522-254386...    28   9.5  
05_02_0124 + 6849034-6851502                                           28   9.5  

>03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325
          Length = 321

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 544 SPGKTSGTLPRELPPRH 594
           SP +TSG LPR LP RH
Sbjct: 205 SPLRTSGLLPRALPARH 221


>11_06_0607 +
           25437897-25438046,25438180-25438236,25438522-25438602,
           25438720-25438777,25438888-25438991,25439064-25439115,
           25439232-25439281,25440279-25440443,25440531-25440603,
           25440714-25440846,25441146-25441203,25441411-25441458,
           25441593-25441676,25441803-25441868,25442419-25442502
          Length = 420

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 707 MHNSDEMDFVIDQKNIQYVRVRSVGCDG 624
           M  +DE+D VID K+I+    RS G  G
Sbjct: 237 MPEADEVDVVIDPKDIELKTARSGGAGG 264


>05_02_0124 + 6849034-6851502
          Length = 822

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 562 GTLPRELPPRHGPGSAPHWTEPSHPTLL 645
           G LPR+ PP   P S P+ T P +P  L
Sbjct: 10  GKLPRQPPPPPPPPSPPNSTFPRYPKSL 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,035,994
Number of Sequences: 37544
Number of extensions: 275539
Number of successful extensions: 1001
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)