Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_K17
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196...    29   5.6  

>02_05_0888 -
           32517876-32518087,32518320-32518694,32519551-32519638,
           32520145-32520384,32521033-32521149,32521213-32521606,
           32521752-32521998,32522086-32522315,32522768-32522823,
           32522903-32523094,32523274-32523376,32523478-32523544,
           32524312-32525154,32525547-32525670,32525965-32526213,
           32526354-32526443,32526530-32526649,32526664-32526738,
           32527001-32527147,32527255-32527365,32527446-32527667,
           32527777-32527896,32527971-32528270,32528355-32528480,
           32529246-32529360,32529556-32530019,32530119-32530253,
           32530684-32530788,32530876-32531053,32531143-32531864
          Length = 2188

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = -3

Query: 507 AAVSAFXSILXQMSVSSRLGEAGSAPRVSRVQAXAXVCXXACCXXXALVCRVQRCRRAPP 328
           AA ++F S+L    +S   GEAG+ P V+ +     VC   C    A  C+V+    AP 
Sbjct: 176 AATASFASLLPDPGIS---GEAGADPEVTILAIELTVCFANC----ASKCKVKEA--APY 226

Query: 327 PPLRSLISNL 298
             + SL+  L
Sbjct: 227 ERVVSLVDQL 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,001,369
Number of Sequences: 37544
Number of extensions: 137420
Number of successful extensions: 476
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)