Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_K14
(1187 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.056
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.056
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.056
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.056
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PP GG P T PPP PP G P P PPP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/127 (22%), Positives = 30/127 (23%)
Frame = +3
Query: 315 PPXNXXKXGXSFFGGGXXXKNXFXKXXPXPXXXRPRXXPXXPXXXGAXGXXQKXXGGXTP 494
PP S GG P P P P G GG P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPP--ITGGPPPPPPPGGLPPITGGPPP 744
Query: 495 PXXXNXFXXXLKXPPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXX 674
P PP G P F K PPP PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPMAPVIPDY 803
Query: 675 PPPQNXP 695
PP+ P
Sbjct: 804 LPPKKVP 810
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXXPPP---QNXPPP 701
PP GG P PPP PP G P P PPP + PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.056
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PP GG P T PPP PP G P P PPP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/127 (22%), Positives = 30/127 (23%)
Frame = +3
Query: 315 PPXNXXKXGXSFFGGGXXXKNXFXKXXPXPXXXRPRXXPXXPXXXGAXGXXQKXXGGXTP 494
PP S GG P P P P G GG P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPP--ITGGPPPPPPPGGLPPITGGPPP 744
Query: 495 PXXXNXFXXXLKXPPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXX 674
P PP G P F K PPP PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPMAPVIPDY 803
Query: 675 PPPQNXP 695
PP+ P
Sbjct: 804 LPPKKVP 810
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXXPPP---QNXPPP 701
PP GG P PPP PP G P P PPP + PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.056
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PP GG P T PPP PP G P P PPP PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/127 (22%), Positives = 30/127 (23%)
Frame = +3
Query: 315 PPXNXXKXGXSFFGGGXXXKNXFXKXXPXPXXXRPRXXPXXPXXXGAXGXXQKXXGGXTP 494
PP S GG P P P P G GG P
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPP--ITGGPPPPPPPGGLPPITGGPPP 327
Query: 495 PXXXNXFXXXLKXPPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXX 674
P PP G P F K PPP PP P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-KGGPPPPPPPGMFAPMAPVIPDY 386
Query: 675 PPPQNXP 695
PP+ P
Sbjct: 387 LPPKKVP 393
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXXPPP---QNXPPP 701
PP GG P PPP PP G P P PPP + PPP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPP 369
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 618 PPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PPP PP P PPP PPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/115 (20%), Positives = 29/115 (25%)
Frame = +3
Query: 609 TXXPPPXPPXXGXXPXXQXPXXPPPQNXPPPXXXXLXXSXSXXNXPXXXXPXXXXFXSXX 788
T PPP PP G P + P P PPP + P P
Sbjct: 271 TPMPPPMPPTPGMTP--RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Query: 789 XPPXSXSPXXXXXXXPXGXXXXPXXXXPXXQXSLXRRPSKNSPAXXKSXSXLXXP 953
P P G P P + P + P S + P
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PP+ GG P + PPP P P P PPP P P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP--PPPSRPPAP 374
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 618 PPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PPP P P P PPP PPP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPP 84
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.7
Identities = 24/115 (20%), Positives = 29/115 (25%)
Frame = +3
Query: 609 TXXPPPXPPXXGXXPXXQXPXXPPPQNXPPPXXXXLXXSXSXXNXPXXXXPXXXXFXSXX 788
T PPP PP G P + P P PPP + P P
Sbjct: 281 TPMPPPMPPTPGMTP--RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Query: 789 XPPXSXSPXXXXXXXPXGXXXXPXXXXPXXQXSLXRRPSKNSPAXXKSXSXLXXP 953
P P G P P + P + P S + P
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 534 PPTXXXXXXGGGXPXXXQQXXXFRKTXXPPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PP+ GG P + PPP P P P PPP P P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP--PPPSRPPAP 384
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 618 PPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PPP PP G P P PP PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 266
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 618 PPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PPP P P PPP PPP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 618 PPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PPP PP G P P PP PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 287
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 618 PPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PPP P P PPP PPP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 618 PPPXPPXXGXXP--XXQXPXXPPPQNXPPP 701
PPP PP G P P PP PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 272
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 618 PPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
PPP P P PPP PPP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 606 KTXXPPPXPPXXGXXPXXQXPXXPPPQNXPPP 701
K PPP PP Q P PPP PPP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPP--PPPP 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,967,994
Number of Sequences: 27780
Number of extensions: 205163
Number of successful extensions: 1216
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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