Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_K11
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159...    29   4.0  
01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256...    29   4.0  
01_01_0046 - 331758-332627                                             29   5.3  
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           28   7.0  

>12_02_0478 +
           19514509-19514940,19515749-19515820,19515954-19515986,
           19516169-19516830,19516905-19517045,19518634-19518830,
           19518878-19518965,19518987-19519041,19519501-19519571,
           19519709-19519763,19519881-19519896,19520286-19520361,
           19521202-19521240,19521312-19521333
          Length = 652

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = -3

Query: 716 GGGGGGXXXKKKKKXXXGGXXXXXKXXXXXXXXPPPPPP 600
           GGGGGG           G               PPPPPP
Sbjct: 49  GGGGGGGVMTSSSSSAAGATSFTQLLIGNLSAPPPPPPP 87


>01_01_0316 +
           2565704-2566134,2566682-2566845,2566989-2567152,
           2567594-2567720,2568347-2568450
          Length = 329

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = -3

Query: 716 GGGGGGXXXKKKKKXXXGGXXXXXKXXXXXXXXPPPPPP 600
           GGGGG    K  ++    G              PPPPPP
Sbjct: 21  GGGGGQERPKAPRRHGSHGPGHYGNHHHHRSRPPPPPPP 59


>01_01_0046 - 331758-332627
          Length = 289

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 661 PPXXFFFFFFXXXPPPPPP 717
           PP  ++F ++   PPPPPP
Sbjct: 9   PPQRYWFPYWTSPPPPPPP 27


>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 716 GGGGGGXXXKKKKKXXXGG 660
           GGGGGG   KKK K   GG
Sbjct: 210 GGGGGGGGGKKKGKKGGGG 228



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 716 GGGGGGXXXKKKKKXXXGG 660
           GGGGGG   KK KK   GG
Sbjct: 211 GGGGGGGGKKKGKKGGGGG 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,066,893
Number of Sequences: 37544
Number of extensions: 207943
Number of successful extensions: 7414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7069
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)