Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_K09
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    30   2.2  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   2.9  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   2.9  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   5.0  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
 Frame = +2

Query: 530 PPPXXPPTPXXXSXXXXXXXAGPXPLQR--PVSXRXSPXLXPXAPXPPXXXRP 682
           PPP  PP     S         P P +R   V    S  L P  P PP   +P
Sbjct: 232 PPPILPPVACLSSTMSPGMLRSPVPRERFNSVESNGSFSLHPPPPVPPPAKKP 284


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/70 (27%), Positives = 21/70 (30%)
 Frame = +2

Query: 515 RXXPXPPPXXPPTPXXXSXXXXXXXAGPXPLQRPVSXRXSPXLXPXAPXPPXXXRPXXLX 694
           R    PPP  PP P           A P P   P      P +   AP PP    P    
Sbjct: 604 RPHAVPPPPPPPPPQSFGMAPISSAAPPPP--PPPPPMGLPAVGAGAPPPPPPPPPSGAG 661

Query: 695 XPXAXXXXAP 724
            P +     P
Sbjct: 662 GPASVLAKLP 671


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/70 (27%), Positives = 21/70 (30%)
 Frame = +2

Query: 515 RXXPXPPPXXPPTPXXXSXXXXXXXAGPXPLQRPVSXRXSPXLXPXAPXPPXXXRPXXLX 694
           R    PPP  PP P           A P P   P      P +   AP PP    P    
Sbjct: 430 RPHAVPPPPPPPPPQSFGMAPISSAAPPPP--PPPPPMGLPAVGAGAPPPPPPPPPSGAG 487

Query: 695 XPXAXXXXAP 724
            P +     P
Sbjct: 488 GPASVLAKLP 497


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/71 (30%), Positives = 22/71 (30%)
 Frame = +3

Query: 525 PXPPXXXPPXPXXXAXXXXXXXXVPXPYNALSPXXXXPXXAPXPPAPXXXSAXXPXXXXX 704
           P P    P      A        VP P  A  P    P  AP PPAP    A  P     
Sbjct: 71  PYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAP-PPAPYPQHA-VPAPAPY 128

Query: 705 XXXXXPPXPXP 737
                PP P P
Sbjct: 129 QQQPPPPPPPP 139


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = -3

Query: 666 GGXGAXGXRXGXXRXETGRCRGXGPAXXXXXXXLXXXGVGGXXGGGXG 523
           GG G  G   G      G C G G             G GG  GGG G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184


>Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical
           protein Y49E10.10 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/81 (25%), Positives = 23/81 (28%)
 Frame = +3

Query: 525 PXPPXXXPPXPXXXAXXXXXXXXVPXPYNALSPXXXXPXXAPXPPAPXXXSAXXPXXXXX 704
           P PP    P P            VP P    +P       AP PPAP   +A        
Sbjct: 199 PPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAP-------APNPPAPENTTAKVETTKPT 251

Query: 705 XXXXXPPXPXPXIXXXXXPXP 767
                 P P P       P P
Sbjct: 252 KAAPPAPTPVPNPVPSPPPPP 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,369,841
Number of Sequences: 27780
Number of extensions: 150788
Number of successful extensions: 783
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)