Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_K08
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0862 - 7172083-7172931 37 0.015
02_05_0686 - 30900748-30902167,30903442-30904742 37 0.015
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 31 0.74
07_01_0479 + 3606663-3607448 31 0.97
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 0.97
08_01_0059 - 394001-394708 30 2.2
03_05_0844 + 28139996-28140736 30 2.2
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 29 3.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.2
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 6.9
>07_01_0862 - 7172083-7172931
Length = 282
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/84 (28%), Positives = 26/84 (30%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXX 463
P +KK F P PP KK P K PP P P PP
Sbjct: 136 PTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQPPLP 195
Query: 462 XXXGGPXPPFXXGXKXKTLFXGAP 391
P PP K K L +P
Sbjct: 196 EKENTPLPPLLLPPKKKPLPPPSP 219
Score = 28.3 bits (60), Expect = 6.9
Identities = 28/130 (21%), Positives = 32/130 (24%), Gaps = 8/130 (6%)
Frame = -2
Query: 747 PPPPXXXXXXXXXXXGXXXXXPXXXXXXXXXXXXXPPXXKKKXXFFXXPPPPXKKKXXXK 568
PPPP P P +KK + P PP KK
Sbjct: 127 PPPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPP 186
Query: 567 XXXPXXX---KKXPXXPPFFXXXX-----PPPXGGGXXXPPXXXXXGGPXPPFXXGXKXK 412
P K+ PP PP P P PPF
Sbjct: 187 SPPPQPPLPEKENTPLPPLLLPPKKKPLPPPSPTAAAKEEPIELEHAAPPPPFVPRPVWP 246
Query: 411 TLFXGAPGKK 382
L G GK+
Sbjct: 247 LLASGGGGKR 256
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPFXXG 424
PPPP K P K P PP PPP G PP P PP G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPP-KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 423 XK 418
K
Sbjct: 373 KK 374
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 6/75 (8%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXX---KXXXPXXXKKXPXXPP---FFXXXXPPPXGGGX 481
PP K PPPP K K P K P PP PPP GG
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 480 XXPPXXXXXGGPXPP 436
PP GG P
Sbjct: 375 GGPPPPPPKGGASRP 389
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = -2
Query: 603 PPPPXK---KKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPF 433
PPPP K K P K P PP PPP G PP G PP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPP-----PPPPGGKKGGPPPPPPKGGASRPPA 391
Query: 432 XXG 424
G
Sbjct: 392 APG 394
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 604 PPPPXKKKXXXXKXXPPXXXKXXXXPPXFFXXXXPPXGXGGXGPP 470
PPPP K PP K PP PP G PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXP 439
PPPP P P PP PPP G PP P P
Sbjct: 424 PPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPP 478
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPP-------XXXXXGGP 445
PPP P ++ P PP F PPP G PP GGP
Sbjct: 169 PPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGP 228
Query: 444 XPPFXXGXKXKTLFXGAP 391
P G G P
Sbjct: 229 PPGMRPGMPPPPFRPGMP 246
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGP----XPP 436
PPPP + P PP PPP GG PP GP PP
Sbjct: 267 PPPPQVPPPPPQAPPPPPPNAPMGMPP---RIPPPPVGGTQPPPPPPPLANGPPRSIPPP 323
Query: 435 FXXGXKXKTLFXGAP 391
G GAP
Sbjct: 324 PMTGGAMANFTPGAP 338
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP ++ P + PP PPP PP P PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPP 57
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPP + P P PP PPP PP P PP
Sbjct: 12 PPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPP 67
>03_05_0844 + 28139996-28140736
Length = 246
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -3
Query: 200 PLSFSP----DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPTKVKATLK-*PLG 36
PLSF P D G R +G R+C L + A + G+ +PT KA + PLG
Sbjct: 21 PLSFLPVDHADYSGGRRMEAGARWCSDSLARRWAKA-AGGVRAPPTPTLAKAERRQAPLG 79
Query: 35 LS 30
LS
Sbjct: 80 LS 81
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXX 463
PP KKK P P +KK K P K P P+ PPP GG P
Sbjct: 77 PPEEKKKPE-----PKPDEKKPDPKPK-PDPCKLIPFPYPYVYP--PPPPCGGCATPHCC 128
Query: 462 XXXGGPXPP 436
P PP
Sbjct: 129 DCHPKPPPP 137
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/56 (25%), Positives = 19/56 (33%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP + + P + P ++ PPP G P P PP
Sbjct: 62 PPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPP 117
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGG-GXXXPP 469
PPPP + P PP PPP GG G PP
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,108,272
Number of Sequences: 37544
Number of extensions: 329394
Number of successful extensions: 816
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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