Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_K08
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 38 0.019
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 38 0.019
AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA... 32 0.95
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 31 1.7
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 31 1.7
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 31 1.7
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 31 1.7
U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptid... 30 2.9
BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p pro... 30 2.9
AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p pro... 30 2.9
AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-P... 30 2.9
AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-P... 30 2.9
AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-P... 30 2.9
AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-P... 30 2.9
AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-P... 30 2.9
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 29 8.9
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 29 8.9
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 29 8.9
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 29 8.9
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 29 8.9
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 29 8.9
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 29 8.9
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 29 8.9
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 37.5 bits (83), Expect = 0.019
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P P PP PPP G PP GP PP
Sbjct: 446 PPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 501
Score = 37.1 bits (82), Expect = 0.025
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P P PP PPP G PP GP PP
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491
Score = 32.3 bits (70), Expect = 0.72
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = -2
Query: 612 FXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPF 433
+ PPPP P P P PPP G PP G P P F
Sbjct: 444 YGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPQF 503
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 37.5 bits (83), Expect = 0.019
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P P PP PPP G PP GP PP
Sbjct: 446 PPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 501
Score = 37.1 bits (82), Expect = 0.025
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P P PP PPP G PP GP PP
Sbjct: 436 PPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491
Score = 32.3 bits (70), Expect = 0.72
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = -2
Query: 612 FXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPF 433
+ PPPP P P P PPP G PP G P P F
Sbjct: 444 YGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPQF 503
>AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA
protein.
Length = 440
Score = 31.9 bits (69), Expect = 0.95
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPP 523
PP KK + PPPP KK P KK PP
Sbjct: 182 PPPPTKKVVYTPPPPPPTKKVVYTPPPPPPPPKKVVYTPP 221
Score = 31.9 bits (69), Expect = 0.95
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPP 523
PP KK + PPPP KK P KK PP
Sbjct: 282 PPPPTKKVVYTPPPPPPTKKVVYTPPPPPPPPKKVVYTPP 321
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 643 PPXXKKKXXXFXXPPPPXKKKXXXXKXXPPXXXKXXXXPP 524
PP K + PPPP KK PP K PP
Sbjct: 168 PPPPPTKKVVYTPPPPPPTKKVVYTPPPPPPTKKVVYTPP 207
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 643 PPXXKKKXXXFXXPPPPXKKKXXXXKXXPPXXXKXXXXPP 524
PP KK + PPPP KK PP K PP
Sbjct: 157 PPPTKK--VVYTPPPPPPTKKVVYTPPPPPPTKKVVYTPP 194
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 643 PPXXKKKXXXFXXPPPPXKKKXXXXKXXPPXXXKXXXXPP 524
PP KK + PPPP KK PP K PP
Sbjct: 270 PPPTKK--VIYTPPPPPPTKKVVYTPPPPPPTKKVVYTPP 307
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 643 PPXXKKKXXXFXXPPPPXKKKXXXXKXXPPXXXKXXXXPP 524
PP KK PPPP KK PP PP
Sbjct: 169 PPPPTKKVVYTPPPPPPTKKVVYTPPPPPPTKKVVYTPPP 208
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P + PP P GG PP GGP PP
Sbjct: 514 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPP 569
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P + PP P GG PP GGP PP
Sbjct: 514 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPP 569
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P + PP P GG PP GGP PP
Sbjct: 514 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPP 569
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P + PP P GG PP GGP PP
Sbjct: 514 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPP 569
>U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptide
protein.
Length = 684
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 409 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 464
Query: 429 XG 424
G
Sbjct: 465 GG 466
>BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p
protein.
Length = 687
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 412 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 467
Query: 429 XG 424
G
Sbjct: 468 GG 469
>AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p
protein.
Length = 831
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 555 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 610
Query: 429 XG 424
G
Sbjct: 611 GG 612
>AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-PB,
isoform B protein.
Length = 829
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 554 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 609
Query: 429 XG 424
G
Sbjct: 610 GG 611
>AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-PE,
isoform E protein.
Length = 684
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 409 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 464
Query: 429 XG 424
G
Sbjct: 465 GG 466
>AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-PC,
isoform C protein.
Length = 684
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 409 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 464
Query: 429 XG 424
G
Sbjct: 465 GG 466
>AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-PA,
isoform A protein.
Length = 684
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 409 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 464
Query: 429 XG 424
G
Sbjct: 465 GG 466
>AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-PD,
isoform D protein.
Length = 687
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPX--GGGXXXPPXXXXXGGPXPPFX 430
PPPP P P P F PPP GG PP GG PP
Sbjct: 412 PPPPPPSFGGAAGGGPPP----PAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPPPAP 467
Query: 429 XG 424
G
Sbjct: 468 GG 469
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 486 PPPPPPPPLPAFVAPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 545
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 546 GIPPPPPPMSASPSKTTISPAP 567
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 581 PPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 640
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 641 GIPPPPPPMSASPSKTTISPAP 662
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 714 PPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 773
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 774 GIPPPPPPMSASPSKTTISPAP 795
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 477 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 536
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 537 GIPPPPPPMSASPSKTTISPAP 558
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 487 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 546
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 547 GIPPPPPPMSASPSKTTISPAP 568
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 477 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 536
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 537 GIPPPPPPMSASPSKTTISPAP 558
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 635 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 694
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 695 GIPPPPPPMSASPSKTTISPAP 716
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 28.7 bits (61), Expect = 8.9
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 11/82 (13%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPP-------XGGGXXXPPXXXXXGG- 448
PPPP P P PP PPP G PP GG
Sbjct: 582 PPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGG 641
Query: 447 ---PXPPFXXGXKXKTLFXGAP 391
P PP KT AP
Sbjct: 642 GIPPPPPPMSASPSKTTISPAP 663
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,706,492
Number of Sequences: 53049
Number of extensions: 487604
Number of successful extensions: 1535
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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